Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 HTR7P1-201ENST00000538670 1336 ntBASIC13.35□□□□□ -0.27
RAB4AP20338 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
RAB4AP20338 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB4AP20338 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RAB4AP20338 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.35□□□□□ -0.27
RAB4AP20338 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
RAB4AP20338 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB4AP20338 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
RAB4AP20338 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB4AP20338 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB4AP20338 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
RAB4AP20338 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
RAB4AP20338 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB4AP20338 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
RAB4AP20338 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
RAB4AP20338 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
RAB4AP20338 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC13.34□□□□□ -0.27
RAB4AP20338 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
RAB4AP20338 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB4AP20338 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB4AP20338 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.34□□□□□ -0.27
RAB4AP20338 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
RAB4AP20338 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.34□□□□□ -0.27
RAB4AP20338 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.34□□□□□ -0.27
RAB4AP20338 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
RAB4AP20338 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAB4AP20338 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAB4AP20338 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB4AP20338 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.34□□□□□ -0.27
RAB4AP20338 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB4AP20338 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAB4AP20338 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB4AP20338 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.34□□□□□ -0.27
RAB4AP20338 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC13.34□□□□□ -0.27
RAB4AP20338 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC13.34□□□□□ -0.27
RAB4AP20338 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC13.34□□□□□ -0.27
RAB4AP20338 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
RAB4AP20338 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB4AP20338 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAB4AP20338 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAB4AP20338 PHGDH-209ENST00000641074 1780 ntBASIC13.34□□□□□ -0.27
RAB4AP20338 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAB4AP20338 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB4AP20338 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.34□□□□□ -0.27
RAB4AP20338 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB4AP20338 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC13.34□□□□□ -0.27
RAB4AP20338 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB4AP20338 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC13.34□□□□□ -0.27
RAB4AP20338 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
RAB4AP20338 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB4AP20338 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB4AP20338 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAB4AP20338 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB4AP20338 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC13.33□□□□□ -0.27
RAB4AP20338 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RAB4AP20338 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
RAB4AP20338 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RAB4AP20338 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RAB4AP20338 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.33□□□□□ -0.27
RAB4AP20338 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB4AP20338 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB4AP20338 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB4AP20338 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB4AP20338 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB4AP20338 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB4AP20338 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB4AP20338 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB4AP20338 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC13.33□□□□□ -0.28
RAB4AP20338 GLRB-205ENST00000512619 728 ntTSL 3 BASIC13.33□□□□□ -0.28
RAB4AP20338 KRT18P41-201ENST00000518924 1277 ntBASIC13.33□□□□□ -0.28
RAB4AP20338 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC13.33□□□□□ -0.28
RAB4AP20338 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RAB4AP20338 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC13.33□□□□□ -0.28
RAB4AP20338 C1QL1P1-201ENST00000568105 661 ntBASIC13.33□□□□□ -0.28
RAB4AP20338 AC087623.3-201ENST00000607047 1098 ntBASIC13.33□□□□□ -0.28
RAB4AP20338 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC13.33□□□□□ -0.28
RAB4AP20338 MIR6821-201ENST00000617625 74 ntBASIC13.33□□□□□ -0.28
RAB4AP20338 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB4AP20338 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RAB4AP20338 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB4AP20338 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
RAB4AP20338 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.33□□□□□ -0.28
RAB4AP20338 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RAB4AP20338 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB4AP20338 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB4AP20338 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB4AP20338 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
RAB4AP20338 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RAB4AP20338 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB4AP20338 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.33□□□□□ -0.28
RAB4AP20338 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB4AP20338 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
RAB4AP20338 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC13.33□□□□□ -0.28
RAB4AP20338 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC13.33□□□□□ -0.28
RAB4AP20338 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB4AP20338 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB4AP20338 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB4AP20338 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
RAB4AP20338 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB4AP20338 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms