Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NFKB1P19838 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
NFKB1P19838 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NFKB1P19838 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
NFKB1P19838 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NFKB1P19838 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
NFKB1P19838 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.66■□□□□ 0.42
NFKB1P19838 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.66■□□□□ 0.42
NFKB1P19838 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.66■□□□□ 0.42
NFKB1P19838 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NFKB1P19838 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.66■□□□□ 0.42
NFKB1P19838 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NFKB1P19838 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.66■□□□□ 0.42
NFKB1P19838 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NFKB1P19838 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
NFKB1P19838 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NFKB1P19838 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.66■□□□□ 0.42
NFKB1P19838 ABCD1P5-201ENST00000445663 754 ntBASIC17.66■□□□□ 0.42
NFKB1P19838 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.66■□□□□ 0.42
NFKB1P19838 KRT16P4-201ENST00000453883 522 ntBASIC17.66■□□□□ 0.42
NFKB1P19838 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.66■□□□□ 0.42
NFKB1P19838 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.66■□□□□ 0.42
NFKB1P19838 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.66■□□□□ 0.42
NFKB1P19838 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
NFKB1P19838 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NFKB1P19838 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
NFKB1P19838 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NFKB1P19838 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NFKB1P19838 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
NFKB1P19838 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NFKB1P19838 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NFKB1P19838 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NFKB1P19838 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NFKB1P19838 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NFKB1P19838 AC060834.1-201ENST00000443027 2032 ntBASIC17.65■□□□□ 0.42
NFKB1P19838 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.65■□□□□ 0.42
NFKB1P19838 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NFKB1P19838 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
NFKB1P19838 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NFKB1P19838 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
NFKB1P19838 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NFKB1P19838 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NFKB1P19838 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.65■□□□□ 0.42
NFKB1P19838 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.65■□□□□ 0.42
NFKB1P19838 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
NFKB1P19838 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NFKB1P19838 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.65■□□□□ 0.42
NFKB1P19838 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.65■□□□□ 0.42
NFKB1P19838 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.65■□□□□ 0.42
NFKB1P19838 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NFKB1P19838 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NFKB1P19838 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NFKB1P19838 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.65■□□□□ 0.42
NFKB1P19838 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.65■□□□□ 0.42
NFKB1P19838 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.65■□□□□ 0.42
NFKB1P19838 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.65■□□□□ 0.42
NFKB1P19838 AL732292.2-201ENST00000609649 430 ntBASIC17.65■□□□□ 0.42
NFKB1P19838 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NFKB1P19838 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
NFKB1P19838 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
NFKB1P19838 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.65■□□□□ 0.42
NFKB1P19838 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NFKB1P19838 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NFKB1P19838 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NFKB1P19838 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NFKB1P19838 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NFKB1P19838 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NFKB1P19838 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.65■□□□□ 0.42
NFKB1P19838 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NFKB1P19838 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NFKB1P19838 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.65■□□□□ 0.42
NFKB1P19838 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NFKB1P19838 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
NFKB1P19838 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NFKB1P19838 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NFKB1P19838 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.64■□□□□ 0.42
NFKB1P19838 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NFKB1P19838 LINC02012-201ENST00000608206 1725 ntBASIC17.64■□□□□ 0.41
NFKB1P19838 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NFKB1P19838 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NFKB1P19838 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NFKB1P19838 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.64■□□□□ 0.41
NFKB1P19838 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NFKB1P19838 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NFKB1P19838 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NFKB1P19838 SPDYE21P-201ENST00000413323 827 ntBASIC17.64■□□□□ 0.41
NFKB1P19838 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NFKB1P19838 NUS1P1-201ENST00000446295 882 ntBASIC17.64■□□□□ 0.41
NFKB1P19838 AC132008.2-207ENST00000454517 770 ntBASIC17.64■□□□□ 0.41
NFKB1P19838 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NFKB1P19838 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.64■□□□□ 0.41
NFKB1P19838 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.64■□□□□ 0.41
NFKB1P19838 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NFKB1P19838 AP001269.4-201ENST00000609611 512 ntBASIC17.64■□□□□ 0.41
NFKB1P19838 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NFKB1P19838 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
NFKB1P19838 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NFKB1P19838 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NFKB1P19838 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
NFKB1P19838 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms