Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
H2AFXP16104 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
H2AFXP16104 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
H2AFXP16104 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.03■□□□□ 0.48
H2AFXP16104 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
H2AFXP16104 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.03■□□□□ 0.48
H2AFXP16104 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.03■□□□□ 0.48
H2AFXP16104 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
H2AFXP16104 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
H2AFXP16104 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2AFXP16104 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
H2AFXP16104 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2AFXP16104 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2AFXP16104 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2AFXP16104 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2AFXP16104 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
H2AFXP16104 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2AFXP16104 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2AFXP16104 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2AFXP16104 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2AFXP16104 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
H2AFXP16104 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
H2AFXP16104 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2AFXP16104 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.02■□□□□ 0.48
H2AFXP16104 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
H2AFXP16104 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.02■□□□□ 0.48
H2AFXP16104 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.02■□□□□ 0.48
H2AFXP16104 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
H2AFXP16104 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.02■□□□□ 0.48
H2AFXP16104 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
H2AFXP16104 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.02■□□□□ 0.48
H2AFXP16104 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.02■□□□□ 0.48
H2AFXP16104 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2AFXP16104 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.02■□□□□ 0.48
H2AFXP16104 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.02■□□□□ 0.48
H2AFXP16104 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.02■□□□□ 0.48
H2AFXP16104 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
H2AFXP16104 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
H2AFXP16104 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
H2AFXP16104 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
H2AFXP16104 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
H2AFXP16104 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
H2AFXP16104 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2AFXP16104 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
H2AFXP16104 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC18.01■□□□□ 0.47
H2AFXP16104 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
H2AFXP16104 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
H2AFXP16104 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2AFXP16104 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
H2AFXP16104 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.01■□□□□ 0.47
H2AFXP16104 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2AFXP16104 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2AFXP16104 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2AFXP16104 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2AFXP16104 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2AFXP16104 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
H2AFXP16104 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.01■□□□□ 0.47
H2AFXP16104 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.01■□□□□ 0.47
H2AFXP16104 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
H2AFXP16104 AP000692.2-201ENST00000608391 879 ntBASIC18.01■□□□□ 0.47
H2AFXP16104 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.01■□□□□ 0.47
H2AFXP16104 AL009178.2-201ENST00000597278 2719 ntBASIC18.01■□□□□ 0.47
H2AFXP16104 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.01■□□□□ 0.47
H2AFXP16104 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
H2AFXP16104 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
H2AFXP16104 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.01■□□□□ 0.47
H2AFXP16104 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.01■□□□□ 0.47
H2AFXP16104 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2AFXP16104 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.01■□□□□ 0.47
H2AFXP16104 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
H2AFXP16104 AL596087.1-201ENST00000400979 1969 ntBASIC18■□□□□ 0.47
H2AFXP16104 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
H2AFXP16104 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18■□□□□ 0.47
H2AFXP16104 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18■□□□□ 0.47
H2AFXP16104 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
H2AFXP16104 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
H2AFXP16104 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
H2AFXP16104 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
H2AFXP16104 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
H2AFXP16104 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
H2AFXP16104 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
H2AFXP16104 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18■□□□□ 0.47
H2AFXP16104 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC18■□□□□ 0.47
H2AFXP16104 MIR638-201ENST00000385237 100 ntBASIC18■□□□□ 0.47
H2AFXP16104 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18■□□□□ 0.47
H2AFXP16104 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18■□□□□ 0.47
H2AFXP16104 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18■□□□□ 0.47
H2AFXP16104 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
H2AFXP16104 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
H2AFXP16104 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18■□□□□ 0.47
H2AFXP16104 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18■□□□□ 0.47
H2AFXP16104 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18■□□□□ 0.47
H2AFXP16104 AC008687.5-201ENST00000593746 558 ntBASIC18■□□□□ 0.47
H2AFXP16104 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18■□□□□ 0.47
H2AFXP16104 AC087623.3-201ENST00000607047 1098 ntBASIC18■□□□□ 0.47
H2AFXP16104 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18■□□□□ 0.47
H2AFXP16104 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18■□□□□ 0.47
H2AFXP16104 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
H2AFXP16104 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
H2AFXP16104 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms