Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 KRT18P55-202ENST00000578578 1546 ntBASIC22.87■■□□□ 1.25
CSB-PGBD3P0DP91 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC22.87■■□□□ 1.25
CSB-PGBD3P0DP91 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
CSB-PGBD3P0DP91 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CSB-PGBD3P0DP91 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
CSB-PGBD3P0DP91 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CSB-PGBD3P0DP91 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CSB-PGBD3P0DP91 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
CSB-PGBD3P0DP91 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CSB-PGBD3P0DP91 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CSB-PGBD3P0DP91 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CSB-PGBD3P0DP91 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC22.86■■□□□ 1.25
CSB-PGBD3P0DP91 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CSB-PGBD3P0DP91 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CSB-PGBD3P0DP91 KLK8-202ENST00000320838 456 ntTSL 5 BASIC22.86■■□□□ 1.25
CSB-PGBD3P0DP91 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CSB-PGBD3P0DP91 CENPM-205ENST00000404067 905 ntTSL 3 BASIC22.86■■□□□ 1.25
CSB-PGBD3P0DP91 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC22.86■■□□□ 1.25
CSB-PGBD3P0DP91 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
CSB-PGBD3P0DP91 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC22.86■■□□□ 1.25
CSB-PGBD3P0DP91 AC243562.1-201ENST00000560672 389 ntBASIC22.86■■□□□ 1.25
CSB-PGBD3P0DP91 AL135744.1-201ENST00000565098 629 ntBASIC22.86■■□□□ 1.25
CSB-PGBD3P0DP91 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CSB-PGBD3P0DP91 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CSB-PGBD3P0DP91 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC22.86■■□□□ 1.25
CSB-PGBD3P0DP91 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
CSB-PGBD3P0DP91 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
CSB-PGBD3P0DP91 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
CSB-PGBD3P0DP91 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CSB-PGBD3P0DP91 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CSB-PGBD3P0DP91 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CSB-PGBD3P0DP91 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CSB-PGBD3P0DP91 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CSB-PGBD3P0DP91 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
CSB-PGBD3P0DP91 TUBB3P1-201ENST00000405796 1332 ntBASIC22.85■■□□□ 1.25
CSB-PGBD3P0DP91 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC22.85■■□□□ 1.25
CSB-PGBD3P0DP91 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CSB-PGBD3P0DP91 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CSB-PGBD3P0DP91 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC22.85■■□□□ 1.25
CSB-PGBD3P0DP91 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC22.85■■□□□ 1.25
CSB-PGBD3P0DP91 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CSB-PGBD3P0DP91 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC22.85■■□□□ 1.25
CSB-PGBD3P0DP91 AC051619.7-201ENST00000568314 623 ntBASIC22.85■■□□□ 1.25
CSB-PGBD3P0DP91 CD7-202ENST00000578509 925 ntTSL 3 BASIC22.85■■□□□ 1.25
CSB-PGBD3P0DP91 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC22.85■■□□□ 1.25
CSB-PGBD3P0DP91 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC22.85■■□□□ 1.25
CSB-PGBD3P0DP91 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CSB-PGBD3P0DP91 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC22.85■■□□□ 1.25
CSB-PGBD3P0DP91 AP000974.1-201ENST00000623909 2387 ntBASIC22.85■■□□□ 1.25
CSB-PGBD3P0DP91 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
CSB-PGBD3P0DP91 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC22.85■■□□□ 1.25
CSB-PGBD3P0DP91 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CSB-PGBD3P0DP91 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CSB-PGBD3P0DP91 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CSB-PGBD3P0DP91 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
CSB-PGBD3P0DP91 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CSB-PGBD3P0DP91 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CSB-PGBD3P0DP91 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC22.84■■□□□ 1.25
CSB-PGBD3P0DP91 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CSB-PGBD3P0DP91 BSG-215ENST00000618006 1329 ntTSL 2 BASIC22.84■■□□□ 1.25
CSB-PGBD3P0DP91 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
CSB-PGBD3P0DP91 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CSB-PGBD3P0DP91 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CSB-PGBD3P0DP91 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CSB-PGBD3P0DP91 AC236430.1-201ENST00000402231 743 ntBASIC22.84■■□□□ 1.25
CSB-PGBD3P0DP91 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
CSB-PGBD3P0DP91 AC015922.1-201ENST00000421102 1152 ntBASIC22.84■■□□□ 1.25
CSB-PGBD3P0DP91 AC005034.1-201ENST00000426657 489 ntBASIC22.84■■□□□ 1.25
CSB-PGBD3P0DP91 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC22.84■■□□□ 1.25
CSB-PGBD3P0DP91 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CSB-PGBD3P0DP91 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC22.84■■□□□ 1.25
CSB-PGBD3P0DP91 AC107918.2-201ENST00000530817 355 ntBASIC22.84■■□□□ 1.25
CSB-PGBD3P0DP91 RBM7-207ENST00000544582 692 ntTSL 3 BASIC22.84■■□□□ 1.25
CSB-PGBD3P0DP91 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC22.84■■□□□ 1.25
CSB-PGBD3P0DP91 DUX4L17-201ENST00000557360 1267 ntBASIC22.84■■□□□ 1.25
CSB-PGBD3P0DP91 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC22.84■■□□□ 1.25
CSB-PGBD3P0DP91 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CSB-PGBD3P0DP91 NAA60-208ENST00000570819 833 ntTSL 2 BASIC22.84■■□□□ 1.25
CSB-PGBD3P0DP91 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC22.84■■□□□ 1.25
CSB-PGBD3P0DP91 AL035252.4-201ENST00000624174 288 ntBASIC22.84■■□□□ 1.25
CSB-PGBD3P0DP91 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CSB-PGBD3P0DP91 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC22.84■■□□□ 1.25
CSB-PGBD3P0DP91 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CSB-PGBD3P0DP91 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CSB-PGBD3P0DP91 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC22.83■■□□□ 1.25
CSB-PGBD3P0DP91 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CSB-PGBD3P0DP91 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC22.83■■□□□ 1.25
CSB-PGBD3P0DP91 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CSB-PGBD3P0DP91 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CSB-PGBD3P0DP91 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC22.83■■□□□ 1.25
CSB-PGBD3P0DP91 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC22.83■■□□□ 1.25
CSB-PGBD3P0DP91 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
CSB-PGBD3P0DP91 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CSB-PGBD3P0DP91 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC22.83■■□□□ 1.25
CSB-PGBD3P0DP91 RPL30-202ENST00000396070 440 ntTSL 2 BASIC22.83■■□□□ 1.25
CSB-PGBD3P0DP91 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CSB-PGBD3P0DP91 RBPMS2P1-201ENST00000437762 623 ntBASIC22.83■■□□□ 1.25
CSB-PGBD3P0DP91 KLF2P3-201ENST00000451977 1087 ntBASIC22.83■■□□□ 1.25
CSB-PGBD3P0DP91 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CSB-PGBD3P0DP91 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC22.83■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms