Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBC1P01850 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBC1P01850 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBC1P01850 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TRBC1P01850 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBC1P01850 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBC1P01850 AL031284.1-201ENST00000419297 478 ntBASIC17.38■□□□□ 0.37
TRBC1P01850 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBC1P01850 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.38■□□□□ 0.37
TRBC1P01850 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.38■□□□□ 0.37
TRBC1P01850 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.38■□□□□ 0.37
TRBC1P01850 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.38■□□□□ 0.37
TRBC1P01850 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.38■□□□□ 0.37
TRBC1P01850 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.38■□□□□ 0.37
TRBC1P01850 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.38■□□□□ 0.37
TRBC1P01850 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
TRBC1P01850 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBC1P01850 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBC1P01850 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBC1P01850 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBC1P01850 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBC1P01850 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.38■□□□□ 0.37
TRBC1P01850 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBC1P01850 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TRBC1P01850 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBC1P01850 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBC1P01850 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TRBC1P01850 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBC1P01850 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBC1P01850 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.37■□□□□ 0.37
TRBC1P01850 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBC1P01850 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TRBC1P01850 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRBC1P01850 AC141586.5-201ENST00000624546 2050 ntBASIC17.37■□□□□ 0.37
TRBC1P01850 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBC1P01850 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBC1P01850 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBC1P01850 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.37■□□□□ 0.37
TRBC1P01850 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBC1P01850 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBC1P01850 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBC1P01850 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.37■□□□□ 0.37
TRBC1P01850 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBC1P01850 RNA5SP419-201ENST00000515908 135 ntBASIC17.37■□□□□ 0.37
TRBC1P01850 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.37■□□□□ 0.37
TRBC1P01850 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.37■□□□□ 0.37
TRBC1P01850 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBC1P01850 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.37■□□□□ 0.37
TRBC1P01850 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.37■□□□□ 0.37
TRBC1P01850 AC004706.3-202ENST00000621574 984 ntBASIC17.37■□□□□ 0.37
TRBC1P01850 FAM215A-202ENST00000632077 792 ntBASIC17.37■□□□□ 0.37
TRBC1P01850 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBC1P01850 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBC1P01850 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.37■□□□□ 0.37
TRBC1P01850 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBC1P01850 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRBC1P01850 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBC1P01850 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TRBC1P01850 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBC1P01850 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRBC1P01850 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.37■□□□□ 0.37
TRBC1P01850 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TRBC1P01850 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBC1P01850 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.37■□□□□ 0.37
TRBC1P01850 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.36■□□□□ 0.37
TRBC1P01850 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
TRBC1P01850 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRBC1P01850 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBC1P01850 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TRBC1P01850 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBC1P01850 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBC1P01850 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBC1P01850 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBC1P01850 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBC1P01850 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBC1P01850 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBC1P01850 RPS2P28-201ENST00000314255 741 ntBASIC17.36■□□□□ 0.37
TRBC1P01850 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.36■□□□□ 0.37
TRBC1P01850 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.36■□□□□ 0.37
TRBC1P01850 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.36■□□□□ 0.37
TRBC1P01850 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.36■□□□□ 0.37
TRBC1P01850 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.36■□□□□ 0.37
TRBC1P01850 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.36■□□□□ 0.37
TRBC1P01850 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.36■□□□□ 0.37
TRBC1P01850 AL353135.1-201ENST00000606729 504 ntBASIC17.36■□□□□ 0.37
TRBC1P01850 AL139424.1-201ENST00000607572 797 ntBASIC17.36■□□□□ 0.37
TRBC1P01850 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
TRBC1P01850 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBC1P01850 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBC1P01850 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBC1P01850 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBC1P01850 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TRBC1P01850 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBC1P01850 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.36■□□□□ 0.37
TRBC1P01850 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBC1P01850 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBC1P01850 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TRBC1P01850 AC116353.5-201ENST00000638148 1699 ntBASIC17.36■□□□□ 0.37
TRBC1P01850 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBC1P01850 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms