Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AC012317.2-201ENST00000623305 2251 ntBASIC19.45■□□□□ 0.7
GGPS1O95749 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GGPS1O95749 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GGPS1O95749 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GGPS1O95749 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
GGPS1O95749 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GGPS1O95749 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
GGPS1O95749 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.45■□□□□ 0.7
GGPS1O95749 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.45■□□□□ 0.7
GGPS1O95749 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.45■□□□□ 0.7
GGPS1O95749 AC004967.1-201ENST00000453589 447 ntBASIC19.45■□□□□ 0.7
GGPS1O95749 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.45■□□□□ 0.7
GGPS1O95749 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.45■□□□□ 0.7
GGPS1O95749 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.45■□□□□ 0.7
GGPS1O95749 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.45■□□□□ 0.7
GGPS1O95749 AC010507.1-201ENST00000633895 436 ntBASIC19.45■□□□□ 0.7
GGPS1O95749 AC134684.3-201ENST00000641758 218 ntBASIC19.45■□□□□ 0.7
GGPS1O95749 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GGPS1O95749 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GGPS1O95749 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GGPS1O95749 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.45■□□□□ 0.7
GGPS1O95749 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
GGPS1O95749 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.45■□□□□ 0.7
GGPS1O95749 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
GGPS1O95749 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GGPS1O95749 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GGPS1O95749 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GGPS1O95749 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.44■□□□□ 0.7
GGPS1O95749 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GGPS1O95749 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.44■□□□□ 0.7
GGPS1O95749 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GGPS1O95749 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GGPS1O95749 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GGPS1O95749 LINC00304-203ENST00000565008 1864 ntBASIC19.44■□□□□ 0.7
GGPS1O95749 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.44■□□□□ 0.7
GGPS1O95749 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.44■□□□□ 0.7
GGPS1O95749 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.44■□□□□ 0.7
GGPS1O95749 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.44■□□□□ 0.7
GGPS1O95749 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GGPS1O95749 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
GGPS1O95749 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.44■□□□□ 0.7
GGPS1O95749 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.44■□□□□ 0.7
GGPS1O95749 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GGPS1O95749 AC006116.8-202ENST00000587620 1550 ntBASIC19.44■□□□□ 0.7
GGPS1O95749 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
GGPS1O95749 HCG11-201ENST00000411553 5696 ntBASIC19.44■□□□□ 0.7
GGPS1O95749 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GGPS1O95749 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
GGPS1O95749 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GGPS1O95749 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.43■□□□□ 0.7
GGPS1O95749 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GGPS1O95749 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GGPS1O95749 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
GGPS1O95749 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
GGPS1O95749 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GGPS1O95749 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
GGPS1O95749 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GGPS1O95749 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.43■□□□□ 0.7
GGPS1O95749 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.43■□□□□ 0.7
GGPS1O95749 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
GGPS1O95749 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.43■□□□□ 0.7
GGPS1O95749 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GGPS1O95749 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
GGPS1O95749 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GGPS1O95749 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GGPS1O95749 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GGPS1O95749 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GGPS1O95749 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.43■□□□□ 0.7
GGPS1O95749 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
GGPS1O95749 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
GGPS1O95749 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GGPS1O95749 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GGPS1O95749 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
GGPS1O95749 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
GGPS1O95749 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.43■□□□□ 0.7
GGPS1O95749 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
GGPS1O95749 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GGPS1O95749 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.43■□□□□ 0.7
GGPS1O95749 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GGPS1O95749 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GGPS1O95749 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GGPS1O95749 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GGPS1O95749 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
GGPS1O95749 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
GGPS1O95749 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GGPS1O95749 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.42■□□□□ 0.7
GGPS1O95749 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.42■□□□□ 0.7
GGPS1O95749 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GGPS1O95749 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
GGPS1O95749 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GGPS1O95749 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
GGPS1O95749 ALG1L5P-201ENST00000482043 771 ntBASIC19.42■□□□□ 0.7
GGPS1O95749 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
GGPS1O95749 AP001160.2-201ENST00000596071 487 ntBASIC19.42■□□□□ 0.7
GGPS1O95749 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.42■□□□□ 0.7
GGPS1O95749 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
GGPS1O95749 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.42■□□□□ 0.7
GGPS1O95749 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
GGPS1O95749 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GGPS1O95749 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms