Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BEST1O76090 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
BEST1O76090 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.17■□□□□ 0.5
BEST1O76090 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.17■□□□□ 0.5
BEST1O76090 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BEST1O76090 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BEST1O76090 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.17■□□□□ 0.5
BEST1O76090 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.17■□□□□ 0.5
BEST1O76090 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BEST1O76090 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BEST1O76090 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
BEST1O76090 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.17■□□□□ 0.5
BEST1O76090 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BEST1O76090 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BEST1O76090 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BEST1O76090 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BEST1O76090 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
BEST1O76090 IGHV3-65-201ENST00000523210 341 ntBASIC18.17■□□□□ 0.5
BEST1O76090 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.17■□□□□ 0.5
BEST1O76090 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.17■□□□□ 0.5
BEST1O76090 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.17■□□□□ 0.5
BEST1O76090 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.17■□□□□ 0.5
BEST1O76090 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
BEST1O76090 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.17■□□□□ 0.5
BEST1O76090 AC116353.5-201ENST00000638148 1699 ntBASIC18.17■□□□□ 0.5
BEST1O76090 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.17■□□□□ 0.5
BEST1O76090 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.17■□□□□ 0.5
BEST1O76090 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
BEST1O76090 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
BEST1O76090 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BEST1O76090 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.17■□□□□ 0.5
BEST1O76090 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BEST1O76090 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
BEST1O76090 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BEST1O76090 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.17■□□□□ 0.5
BEST1O76090 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST1O76090 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.16■□□□□ 0.5
BEST1O76090 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.16■□□□□ 0.5
BEST1O76090 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.16■□□□□ 0.5
BEST1O76090 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.16■□□□□ 0.5
BEST1O76090 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST1O76090 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.16■□□□□ 0.5
BEST1O76090 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST1O76090 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST1O76090 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST1O76090 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BEST1O76090 AC093525.9-201ENST00000624961 1746 ntBASIC18.16■□□□□ 0.5
BEST1O76090 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST1O76090 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
BEST1O76090 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST1O76090 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.16■□□□□ 0.5
BEST1O76090 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.16■□□□□ 0.5
BEST1O76090 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
BEST1O76090 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BEST1O76090 AC108073.2-201ENST00000464002 357 ntBASIC18.16■□□□□ 0.5
BEST1O76090 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.16■□□□□ 0.5
BEST1O76090 AC108751.1-201ENST00000490852 363 ntBASIC18.16■□□□□ 0.5
BEST1O76090 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.16■□□□□ 0.5
BEST1O76090 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST1O76090 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
BEST1O76090 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
BEST1O76090 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST1O76090 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST1O76090 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST1O76090 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.16■□□□□ 0.5
BEST1O76090 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST1O76090 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BEST1O76090 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.15■□□□□ 0.5
BEST1O76090 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BEST1O76090 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BEST1O76090 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BEST1O76090 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
BEST1O76090 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BEST1O76090 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BEST1O76090 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BEST1O76090 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
BEST1O76090 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BEST1O76090 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
BEST1O76090 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BEST1O76090 AP002414.1-201ENST00000391405 1147 ntBASIC18.15■□□□□ 0.5
BEST1O76090 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BEST1O76090 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.15■□□□□ 0.5
BEST1O76090 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.15■□□□□ 0.5
BEST1O76090 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.15■□□□□ 0.5
BEST1O76090 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
BEST1O76090 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BEST1O76090 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.15■□□□□ 0.5
BEST1O76090 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
BEST1O76090 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BEST1O76090 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.15■□□□□ 0.5
BEST1O76090 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
BEST1O76090 TERC-201ENST00000602385 541 ntBASIC18.15■□□□□ 0.5
BEST1O76090 AC004790.2-201ENST00000623588 572 ntBASIC18.15■□□□□ 0.5
BEST1O76090 AC106820.2-201ENST00000563775 3264 ntBASIC18.15■□□□□ 0.5
BEST1O76090 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BEST1O76090 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.15■□□□□ 0.5
BEST1O76090 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BEST1O76090 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BEST1O76090 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.15■□□□□ 0.5
BEST1O76090 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms