Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.9■□□□□ 0.46
TSPAN3O60637 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.9■□□□□ 0.46
TSPAN3O60637 AC034105.1-201ENST00000563488 319 ntBASIC17.9■□□□□ 0.46
TSPAN3O60637 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
TSPAN3O60637 Z83851.2-201ENST00000609564 659 ntBASIC17.9■□□□□ 0.46
TSPAN3O60637 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TSPAN3O60637 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TSPAN3O60637 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TSPAN3O60637 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TSPAN3O60637 LYSMD4-203ENST00000378904 2122 ntBASIC17.9■□□□□ 0.46
TSPAN3O60637 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TSPAN3O60637 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.9■□□□□ 0.46
TSPAN3O60637 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TSPAN3O60637 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.9■□□□□ 0.46
TSPAN3O60637 AL135999.2-201ENST00000622438 1686 ntBASIC17.9■□□□□ 0.46
TSPAN3O60637 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TSPAN3O60637 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TSPAN3O60637 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TSPAN3O60637 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.89■□□□□ 0.45
TSPAN3O60637 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
TSPAN3O60637 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TSPAN3O60637 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TSPAN3O60637 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TSPAN3O60637 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TSPAN3O60637 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.89■□□□□ 0.45
TSPAN3O60637 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TSPAN3O60637 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.89■□□□□ 0.45
TSPAN3O60637 AC145285.3-201ENST00000564603 959 ntBASIC17.89■□□□□ 0.45
TSPAN3O60637 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TSPAN3O60637 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TSPAN3O60637 AL139424.1-201ENST00000607572 797 ntBASIC17.89■□□□□ 0.45
TSPAN3O60637 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.89■□□□□ 0.45
TSPAN3O60637 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TSPAN3O60637 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TSPAN3O60637 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
TSPAN3O60637 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.89■□□□□ 0.45
TSPAN3O60637 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TSPAN3O60637 AC067852.2-201ENST00000590513 2313 ntBASIC17.89■□□□□ 0.45
TSPAN3O60637 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TSPAN3O60637 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TSPAN3O60637 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TSPAN3O60637 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TSPAN3O60637 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.89■□□□□ 0.45
TSPAN3O60637 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TSPAN3O60637 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TSPAN3O60637 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TSPAN3O60637 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TSPAN3O60637 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TSPAN3O60637 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TSPAN3O60637 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.88■□□□□ 0.45
TSPAN3O60637 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.88■□□□□ 0.45
TSPAN3O60637 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.88■□□□□ 0.45
TSPAN3O60637 AC009947.1-201ENST00000444350 727 ntBASIC17.88■□□□□ 0.45
TSPAN3O60637 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TSPAN3O60637 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.88■□□□□ 0.45
TSPAN3O60637 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TSPAN3O60637 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TSPAN3O60637 KRT18P58-201ENST00000527480 1120 ntBASIC17.88■□□□□ 0.45
TSPAN3O60637 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
TSPAN3O60637 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.88■□□□□ 0.45
TSPAN3O60637 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.88■□□□□ 0.45
TSPAN3O60637 TERC-201ENST00000602385 541 ntBASIC17.88■□□□□ 0.45
TSPAN3O60637 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.88■□□□□ 0.45
TSPAN3O60637 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
TSPAN3O60637 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TSPAN3O60637 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TSPAN3O60637 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TSPAN3O60637 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TSPAN3O60637 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TSPAN3O60637 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TSPAN3O60637 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TSPAN3O60637 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TSPAN3O60637 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.88■□□□□ 0.45
TSPAN3O60637 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.88■□□□□ 0.45
TSPAN3O60637 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TSPAN3O60637 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TSPAN3O60637 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.87■□□□□ 0.45
TSPAN3O60637 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.87■□□□□ 0.45
TSPAN3O60637 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TSPAN3O60637 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TSPAN3O60637 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.87■□□□□ 0.45
TSPAN3O60637 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TSPAN3O60637 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TSPAN3O60637 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TSPAN3O60637 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TSPAN3O60637 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TSPAN3O60637 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TSPAN3O60637 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.87■□□□□ 0.45
TSPAN3O60637 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.87■□□□□ 0.45
TSPAN3O60637 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TSPAN3O60637 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TSPAN3O60637 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TSPAN3O60637 AC007967.2-201ENST00000432613 625 ntBASIC17.87■□□□□ 0.45
TSPAN3O60637 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.87■□□□□ 0.45
TSPAN3O60637 AC140113.2-201ENST00000604370 208 ntBASIC17.87■□□□□ 0.45
TSPAN3O60637 AL353135.1-201ENST00000606729 504 ntBASIC17.87■□□□□ 0.45
TSPAN3O60637 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TSPAN3O60637 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
TSPAN3O60637 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TSPAN3O60637 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms