Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA12O60330 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PCDHGA12O60330 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA12O60330 NCF1C-201ENST00000438382 1427 ntBASIC17.21■□□□□ 0.35
PCDHGA12O60330 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PCDHGA12O60330 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGA12O60330 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHGA12O60330 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA12O60330 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA12O60330 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDHGA12O60330 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA12O60330 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA12O60330 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA12O60330 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA12O60330 ELK2BP-201ENST00000415014 1224 ntBASIC17.21■□□□□ 0.35
PCDHGA12O60330 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PCDHGA12O60330 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
PCDHGA12O60330 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGA12O60330 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA12O60330 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGA12O60330 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PCDHGA12O60330 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDHGA12O60330 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA12O60330 MIR4469-201ENST00000583919 79 ntBASIC17.21■□□□□ 0.35
PCDHGA12O60330 AC008667.4-201ENST00000607370 168 ntBASIC17.21■□□□□ 0.35
PCDHGA12O60330 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA12O60330 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
PCDHGA12O60330 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA12O60330 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDHGA12O60330 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA12O60330 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PCDHGA12O60330 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA12O60330 AC093010.1-201ENST00000473625 1624 ntBASIC17.21■□□□□ 0.35
PCDHGA12O60330 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA12O60330 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PCDHGA12O60330 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
PCDHGA12O60330 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PCDHGA12O60330 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
PCDHGA12O60330 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PCDHGA12O60330 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.21■□□□□ 0.34
PCDHGA12O60330 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA12O60330 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGA12O60330 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PCDHGA12O60330 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PCDHGA12O60330 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PCDHGA12O60330 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA12O60330 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA12O60330 AC006504.4-201ENST00000592118 1568 ntBASIC17.2■□□□□ 0.34
PCDHGA12O60330 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA12O60330 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA12O60330 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA12O60330 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA12O60330 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
PCDHGA12O60330 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGA12O60330 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA12O60330 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PCDHGA12O60330 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGA12O60330 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
PCDHGA12O60330 MKNK2P1-201ENST00000437526 628 ntBASIC17.2■□□□□ 0.34
PCDHGA12O60330 METTL21AP1-201ENST00000438852 635 ntBASIC17.2■□□□□ 0.34
PCDHGA12O60330 AC108073.2-201ENST00000464002 357 ntBASIC17.2■□□□□ 0.34
PCDHGA12O60330 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA12O60330 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDHGA12O60330 IGHV3-65-201ENST00000523210 341 ntBASIC17.2■□□□□ 0.34
PCDHGA12O60330 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
PCDHGA12O60330 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGA12O60330 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA12O60330 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA12O60330 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGA12O60330 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGA12O60330 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA12O60330 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGA12O60330 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA12O60330 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGA12O60330 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA12O60330 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA12O60330 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA12O60330 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA12O60330 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA12O60330 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
PCDHGA12O60330 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA12O60330 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA12O60330 AC134043.2-201ENST00000624206 2238 ntBASIC17.19■□□□□ 0.34
PCDHGA12O60330 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PCDHGA12O60330 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.19■□□□□ 0.34
PCDHGA12O60330 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHGA12O60330 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHGA12O60330 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHGA12O60330 HCG4B-203ENST00000450128 991 ntBASIC17.19■□□□□ 0.34
PCDHGA12O60330 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHGA12O60330 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHGA12O60330 MIR4751-201ENST00000578027 74 ntBASIC17.19■□□□□ 0.34
PCDHGA12O60330 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHGA12O60330 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHGA12O60330 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PCDHGA12O60330 AC092865.6-201ENST00000642101 219 ntBASIC17.19■□□□□ 0.34
PCDHGA12O60330 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PCDHGA12O60330 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA12O60330 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHGA12O60330 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms