Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP2A1O14983 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP2A1O14983 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP2A1O14983 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP2A1O14983 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.82■□□□□ 0.76
ATP2A1O14983 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.82■□□□□ 0.76
ATP2A1O14983 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.82■□□□□ 0.76
ATP2A1O14983 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP2A1O14983 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATP2A1O14983 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATP2A1O14983 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
ATP2A1O14983 LINC00304-203ENST00000565008 1864 ntBASIC19.82■□□□□ 0.76
ATP2A1O14983 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2A1O14983 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2A1O14983 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP2A1O14983 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2A1O14983 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP2A1O14983 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2A1O14983 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2A1O14983 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP2A1O14983 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
ATP2A1O14983 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP2A1O14983 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2A1O14983 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2A1O14983 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2A1O14983 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.81■□□□□ 0.76
ATP2A1O14983 ACTG1P14-201ENST00000446382 1122 ntBASIC19.81■□□□□ 0.76
ATP2A1O14983 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2A1O14983 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.81■□□□□ 0.76
ATP2A1O14983 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP2A1O14983 AL078644.1-201ENST00000609881 752 ntBASIC19.81■□□□□ 0.76
ATP2A1O14983 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2A1O14983 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2A1O14983 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2A1O14983 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2A1O14983 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2A1O14983 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.81■□□□□ 0.76
ATP2A1O14983 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
ATP2A1O14983 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
ATP2A1O14983 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP2A1O14983 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ATP2A1O14983 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2A1O14983 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.8■□□□□ 0.76
ATP2A1O14983 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2A1O14983 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2A1O14983 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2A1O14983 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2A1O14983 AC006116.8-202ENST00000587620 1550 ntBASIC19.8■□□□□ 0.76
ATP2A1O14983 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2A1O14983 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ATP2A1O14983 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.8■□□□□ 0.76
ATP2A1O14983 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
ATP2A1O14983 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2A1O14983 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.8■□□□□ 0.76
ATP2A1O14983 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2A1O14983 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
ATP2A1O14983 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.8■□□□□ 0.76
ATP2A1O14983 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ATP2A1O14983 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2A1O14983 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2A1O14983 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2A1O14983 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2A1O14983 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2A1O14983 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2A1O14983 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.8■□□□□ 0.76
ATP2A1O14983 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.8■□□□□ 0.76
ATP2A1O14983 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.8■□□□□ 0.76
ATP2A1O14983 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ATP2A1O14983 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.79■□□□□ 0.76
ATP2A1O14983 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2A1O14983 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.79■□□□□ 0.76
ATP2A1O14983 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2A1O14983 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ATP2A1O14983 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2A1O14983 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2A1O14983 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2A1O14983 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2A1O14983 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2A1O14983 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.79■□□□□ 0.76
ATP2A1O14983 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
ATP2A1O14983 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.79■□□□□ 0.76
ATP2A1O14983 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.79■□□□□ 0.76
ATP2A1O14983 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
ATP2A1O14983 SNHG9-202ENST00000564014 471 ntBASIC19.79■□□□□ 0.76
ATP2A1O14983 AL031432.2-201ENST00000566714 459 ntBASIC19.79■□□□□ 0.76
ATP2A1O14983 AL928711.1-201ENST00000570165 459 ntBASIC19.79■□□□□ 0.76
ATP2A1O14983 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.79■□□□□ 0.76
ATP2A1O14983 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.79■□□□□ 0.76
ATP2A1O14983 AL596442.2-201ENST00000610240 980 ntBASIC19.79■□□□□ 0.76
ATP2A1O14983 ACTL9-202ENST00000612068 1252 ntBASIC19.79■□□□□ 0.76
ATP2A1O14983 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.79■□□□□ 0.76
ATP2A1O14983 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2A1O14983 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
ATP2A1O14983 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
ATP2A1O14983 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ATP2A1O14983 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.79■□□□□ 0.76
ATP2A1O14983 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2A1O14983 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ATP2A1O14983 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
ATP2A1O14983 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms