Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
CUX2O14529 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
CUX2O14529 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
CUX2O14529 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC29.31■■■□□ 2.28
CUX2O14529 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC29.31■■■□□ 2.28
CUX2O14529 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC29.31■■■□□ 2.28
CUX2O14529 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC29.31■■■□□ 2.28
CUX2O14529 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC29.31■■■□□ 2.28
CUX2O14529 AC106872.11-201ENST00000605838 421 ntBASIC29.31■■■□□ 2.28
CUX2O14529 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC29.31■■■□□ 2.28
CUX2O14529 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC29.31■■■□□ 2.28
CUX2O14529 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CUX2O14529 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC29.31■■■□□ 2.28
CUX2O14529 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CUX2O14529 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
CUX2O14529 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
CUX2O14529 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC29.3■■■□□ 2.28
CUX2O14529 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CUX2O14529 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
CUX2O14529 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC29.3■■■□□ 2.28
CUX2O14529 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC29.3■■■□□ 2.28
CUX2O14529 AL583810.1-201ENST00000553344 1045 ntBASIC29.3■■■□□ 2.28
CUX2O14529 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC29.3■■■□□ 2.28
CUX2O14529 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC29.3■■■□□ 2.28
CUX2O14529 CHCHD2P3-201ENST00000603038 451 ntBASIC29.3■■■□□ 2.28
CUX2O14529 TEX28P1-201ENST00000613479 1221 ntBASIC29.3■■■□□ 2.28
CUX2O14529 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC29.3■■■□□ 2.28
CUX2O14529 TEX28P2-201ENST00000617764 1221 ntBASIC29.3■■■□□ 2.28
CUX2O14529 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC29.3■■■□□ 2.28
CUX2O14529 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC29.3■■■□□ 2.28
CUX2O14529 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC29.3■■■□□ 2.28
CUX2O14529 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CUX2O14529 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CUX2O14529 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CUX2O14529 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC29.3■■■□□ 2.28
CUX2O14529 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC29.3■■■□□ 2.28
CUX2O14529 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CUX2O14529 AC093004.1-201ENST00000508850 424 ntBASIC29.29■■■□□ 2.28
CUX2O14529 AC104989.1-201ENST00000519711 778 ntBASIC29.29■■■□□ 2.28
CUX2O14529 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC29.29■■■□□ 2.28
CUX2O14529 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CUX2O14529 SNX1-214ENST00000625244 324 ntTSL 5 BASIC29.29■■■□□ 2.28
CUX2O14529 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
CUX2O14529 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CUX2O14529 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC29.29■■■□□ 2.28
CUX2O14529 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC29.29■■■□□ 2.28
CUX2O14529 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CUX2O14529 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC29.29■■■□□ 2.28
CUX2O14529 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC29.29■■■□□ 2.28
CUX2O14529 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
CUX2O14529 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC29.29■■■□□ 2.28
CUX2O14529 AC109635.5-201ENST00000533593 962 ntBASIC29.29■■■□□ 2.28
CUX2O14529 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC29.29■■■□□ 2.28
CUX2O14529 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC29.28■■■□□ 2.28
CUX2O14529 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC29.28■■■□□ 2.28
CUX2O14529 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC29.28■■■□□ 2.28
CUX2O14529 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC29.28■■■□□ 2.28
CUX2O14529 AC100803.2-201ENST00000562459 1963 ntBASIC29.28■■■□□ 2.28
CUX2O14529 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CUX2O14529 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
CUX2O14529 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
CUX2O14529 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC29.28■■■□□ 2.28
CUX2O14529 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CUX2O14529 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CUX2O14529 MIR663B-201ENST00000408361 115 ntBASIC29.28■■■□□ 2.28
CUX2O14529 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC29.28■■■□□ 2.28
CUX2O14529 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
CUX2O14529 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC29.28■■■□□ 2.28
CUX2O14529 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC29.27■■■□□ 2.28
CUX2O14529 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC29.27■■■□□ 2.28
CUX2O14529 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CUX2O14529 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC29.27■■■□□ 2.28
CUX2O14529 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CUX2O14529 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC29.27■■■□□ 2.28
CUX2O14529 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CUX2O14529 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC29.27■■■□□ 2.28
CUX2O14529 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CUX2O14529 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC29.27■■■□□ 2.28
CUX2O14529 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
CUX2O14529 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
CUX2O14529 ZNF890P-202ENST00000530367 1156 ntBASIC29.27■■■□□ 2.28
CUX2O14529 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC29.27■■■□□ 2.28
CUX2O14529 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
CUX2O14529 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CUX2O14529 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CUX2O14529 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
CUX2O14529 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
CUX2O14529 SLC25A24-204ENST00000569674 2357 ntBASIC29.26■■■□□ 2.28
CUX2O14529 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
CUX2O14529 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
CUX2O14529 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC29.26■■■□□ 2.27
CUX2O14529 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
CUX2O14529 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
CUX2O14529 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC29.26■■■□□ 2.27
CUX2O14529 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC29.26■■■□□ 2.27
CUX2O14529 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CUX2O14529 AL023806.1-201ENST00000603994 1649 ntBASIC29.26■■■□□ 2.27
CUX2O14529 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CUX2O14529 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC29.26■■■□□ 2.27
CUX2O14529 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms