Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
YJEFN3A6XGL0 AC116353.5-201ENST00000638148 1699 ntBASIC18.08■□□□□ 0.48
YJEFN3A6XGL0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
YJEFN3A6XGL0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
YJEFN3A6XGL0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
YJEFN3A6XGL0 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.08■□□□□ 0.48
YJEFN3A6XGL0 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
YJEFN3A6XGL0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.08■□□□□ 0.48
YJEFN3A6XGL0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.08■□□□□ 0.48
YJEFN3A6XGL0 GPR89P-201ENST00000407924 1495 ntBASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 AC098831.1-202ENST00000438821 336 ntBASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 AC136632.2-201ENST00000512891 861 ntBASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 IGHV3-22-201ENST00000520721 359 ntBASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.07■□□□□ 0.48
YJEFN3A6XGL0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
YJEFN3A6XGL0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
YJEFN3A6XGL0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.06■□□□□ 0.48
YJEFN3A6XGL0 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.06■□□□□ 0.48
YJEFN3A6XGL0 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
YJEFN3A6XGL0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.06■□□□□ 0.48
YJEFN3A6XGL0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
YJEFN3A6XGL0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
YJEFN3A6XGL0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
YJEFN3A6XGL0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.06■□□□□ 0.48
YJEFN3A6XGL0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
YJEFN3A6XGL0 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.06■□□□□ 0.48
YJEFN3A6XGL0 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.06■□□□□ 0.48
YJEFN3A6XGL0 AC120114.3-201ENST00000611923 658 ntBASIC18.06■□□□□ 0.48
YJEFN3A6XGL0 BX640515.1-201ENST00000617215 977 ntBASIC18.06■□□□□ 0.48
YJEFN3A6XGL0 MIR1199-201ENST00000621445 119 ntBASIC18.06■□□□□ 0.48
YJEFN3A6XGL0 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.06■□□□□ 0.48
YJEFN3A6XGL0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.06■□□□□ 0.48
YJEFN3A6XGL0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
YJEFN3A6XGL0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
YJEFN3A6XGL0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
YJEFN3A6XGL0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
YJEFN3A6XGL0 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.06■□□□□ 0.48
YJEFN3A6XGL0 AC093525.9-201ENST00000624961 1746 ntBASIC18.06■□□□□ 0.48
YJEFN3A6XGL0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.06■□□□□ 0.48
YJEFN3A6XGL0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
YJEFN3A6XGL0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
YJEFN3A6XGL0 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
YJEFN3A6XGL0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
YJEFN3A6XGL0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.05■□□□□ 0.48
YJEFN3A6XGL0 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
YJEFN3A6XGL0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
YJEFN3A6XGL0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
YJEFN3A6XGL0 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
YJEFN3A6XGL0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
YJEFN3A6XGL0 PTCHD3P3-201ENST00000403073 906 ntBASIC18.05■□□□□ 0.48
YJEFN3A6XGL0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
YJEFN3A6XGL0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
YJEFN3A6XGL0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.05■□□□□ 0.48
YJEFN3A6XGL0 SLC25A1P1-201ENST00000528351 927 ntBASIC18.05■□□□□ 0.48
YJEFN3A6XGL0 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.05■□□□□ 0.48
YJEFN3A6XGL0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.05■□□□□ 0.48
YJEFN3A6XGL0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
YJEFN3A6XGL0 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.05■□□□□ 0.48
YJEFN3A6XGL0 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
YJEFN3A6XGL0 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
YJEFN3A6XGL0 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
YJEFN3A6XGL0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
YJEFN3A6XGL0 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.05■□□□□ 0.48
YJEFN3A6XGL0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
YJEFN3A6XGL0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
YJEFN3A6XGL0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
YJEFN3A6XGL0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
YJEFN3A6XGL0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
YJEFN3A6XGL0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
YJEFN3A6XGL0 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
YJEFN3A6XGL0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms