Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 UBE2SP1-201ENST00000450587 669 ntBASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.19□□□□□ -0.14
DUXBA0A1W2PPF3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 RNF216P1-203ENST00000404404 2427 ntBASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 PCDHB17P-201ENST00000539533 2393 ntBASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.18□□□□□ -0.14
DUXBA0A1W2PPF3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.17□□□□□ -0.14
DUXBA0A1W2PPF3 AL356309.3-201ENST00000624132 1934 ntBASIC14.17□□□□□ -0.14
DUXBA0A1W2PPF3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.17□□□□□ -0.14
DUXBA0A1W2PPF3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.17□□□□□ -0.14
DUXBA0A1W2PPF3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
DUXBA0A1W2PPF3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
DUXBA0A1W2PPF3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DUXBA0A1W2PPF3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC14.17□□□□□ -0.14
DUXBA0A1W2PPF3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.17□□□□□ -0.14
DUXBA0A1W2PPF3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DUXBA0A1W2PPF3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
DUXBA0A1W2PPF3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms