Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 STK24-203ENST00000397517 4578 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 KRT18P38-201ENST00000449496 1282 ntBASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 AC092647.4-201ENST00000457211 535 ntBASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 VENTXP5-201ENST00000523979 775 ntBASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 AC073508.3-201ENST00000619697 1419 ntBASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00959A0A1B0GUT2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 AC005521.1-201ENST00000393351 872 ntBASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 AK4P3-201ENST00000418260 669 ntBASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 AGGF1P2-201ENST00000426656 2106 ntBASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 GUSBP12-201ENST00000513727 720 ntBASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 RNF126P1-202ENST00000569893 925 ntBASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 AC109462.3-201ENST00000573934 613 ntBASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 AC012306.2-201ENST00000609350 630 ntBASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 AC066615.1-201ENST00000640911 628 ntBASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 AC097493.4-201ENST00000641197 219 ntBASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00959A0A1B0GUT2 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00959A0A1B0GUT2 AC105020.1-201ENST00000435356 2205 ntBASIC11.84□□□□□ -0.51
LINC00959A0A1B0GUT2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00959A0A1B0GUT2 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms