Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 AC097374.2-201ENST00000618617 1306 ntBASIC14.56□□□□□ -0.08
TRBV6-7A0A0A0MS04 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-7A0A0A0MS04 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-7A0A0A0MS04 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-7A0A0A0MS04 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.56□□□□□ -0.08
TRBV6-7A0A0A0MS04 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-7A0A0A0MS04 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-7A0A0A0MS04 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-7A0A0A0MS04 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TRBV6-7A0A0A0MS04 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-7A0A0A0MS04 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-7A0A0A0MS04 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-7A0A0A0MS04 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV6-7A0A0A0MS04 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-7A0A0A0MS04 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TRBV6-7A0A0A0MS04 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 BX664615.1-201ENST00000443558 458 ntBASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-7A0A0A0MS04 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 YBX1P2-201ENST00000489612 999 ntBASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 AC139887.4-201ENST00000607877 719 ntBASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-7A0A0A0MS04 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms