Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHB11Q9Y5F2 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PCDHB11Q9Y5F2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB11Q9Y5F2 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB11Q9Y5F2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PCDHB11Q9Y5F2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHB11Q9Y5F2 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB11Q9Y5F2 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB11Q9Y5F2 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB11Q9Y5F2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB11Q9Y5F2 AP005117.1-201ENST00000584346 1413 ntBASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 HLA-J-201ENST00000462773 1622 ntBASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 AC139713.2-201ENST00000641328 2723 ntBASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 AC027601.4-201ENST00000611259 610 ntBASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHB11Q9Y5F2 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 AC005104.2-201ENST00000427818 678 ntBASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 AC092183.1-201ENST00000469884 875 ntBASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHB11Q9Y5F2 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHB11Q9Y5F2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB11Q9Y5F2 REXO1L11P-201ENST00000620964 1927 ntBASIC17.02■□□□□ 0.32
PCDHB11Q9Y5F2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PCDHB11Q9Y5F2 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB11Q9Y5F2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.02■□□□□ 0.32
PCDHB11Q9Y5F2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHB11Q9Y5F2 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB11Q9Y5F2 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB11Q9Y5F2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PCDHB11Q9Y5F2 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB11Q9Y5F2 HNRNPDP1-201ENST00000439535 754 ntBASIC17.02■□□□□ 0.32
PCDHB11Q9Y5F2 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB11Q9Y5F2 AC002558.1-201ENST00000488906 803 ntBASIC17.02■□□□□ 0.32
PCDHB11Q9Y5F2 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms