Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 AL121761.2-201ENST00000598007 1648 ntBASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 AC092919.2-201ENST00000623631 1645 ntBASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 MIR770-201ENST00000390219 98 ntBASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 AC087163.2-201ENST00000457299 853 ntBASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 SLC25A6P2-201ENST00000497974 877 ntBASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 MIR3197-201ENST00000582241 73 ntBASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB7Q9Y5E2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB7Q9Y5E2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHB7Q9Y5E2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB7Q9Y5E2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB7Q9Y5E2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHB7Q9Y5E2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB7Q9Y5E2 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB7Q9Y5E2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB7Q9Y5E2 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHB7Q9Y5E2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB7Q9Y5E2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB7Q9Y5E2 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB7Q9Y5E2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHB7Q9Y5E2 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHB7Q9Y5E2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB7Q9Y5E2 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB7Q9Y5E2 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB7Q9Y5E2 AL139400.1-201ENST00000366220 510 ntBASIC18.6■□□□□ 0.57
PCDHB7Q9Y5E2 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHB7Q9Y5E2 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHB7Q9Y5E2 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.6■□□□□ 0.57
PCDHB7Q9Y5E2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB7Q9Y5E2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB7Q9Y5E2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB7Q9Y5E2 AC004408.2-201ENST00000623613 2777 ntBASIC18.6■□□□□ 0.57
PCDHB7Q9Y5E2 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB7Q9Y5E2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PCDHB7Q9Y5E2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB7Q9Y5E2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB7Q9Y5E2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB7Q9Y5E2 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHB7Q9Y5E2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
PCDHB7Q9Y5E2 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB7Q9Y5E2 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB7Q9Y5E2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PCDHB7Q9Y5E2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB7Q9Y5E2 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PCDHB7Q9Y5E2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PCDHB7Q9Y5E2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
PCDHB7Q9Y5E2 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB7Q9Y5E2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB7Q9Y5E2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB7Q9Y5E2 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.59■□□□□ 0.57
PCDHB7Q9Y5E2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PCDHB7Q9Y5E2 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB7Q9Y5E2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHB7Q9Y5E2 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB7Q9Y5E2 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHB7Q9Y5E2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PCDHB7Q9Y5E2 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB7Q9Y5E2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PCDHB7Q9Y5E2 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHB7Q9Y5E2 AC002056.1-201ENST00000395613 760 ntBASIC18.59■□□□□ 0.57
PCDHB7Q9Y5E2 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.59■□□□□ 0.57
PCDHB7Q9Y5E2 AC092364.2-202ENST00000597012 1073 ntBASIC18.59■□□□□ 0.57
PCDHB7Q9Y5E2 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PCDHB7Q9Y5E2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PCDHB7Q9Y5E2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB7Q9Y5E2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHB7Q9Y5E2 AC104581.1-202ENST00000635932 2618 ntBASIC18.59■□□□□ 0.57
PCDHB7Q9Y5E2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB7Q9Y5E2 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms