Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCKAP1Q9Y2A7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCKAP1Q9Y2A7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCKAP1Q9Y2A7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NCKAP1Q9Y2A7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
NCKAP1Q9Y2A7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.4■□□□□ 0.38
NCKAP1Q9Y2A7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.4■□□□□ 0.38
NCKAP1Q9Y2A7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCKAP1Q9Y2A7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NCKAP1Q9Y2A7 AC005829.1-201ENST00000570002 483 ntBASIC17.4■□□□□ 0.38
NCKAP1Q9Y2A7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.4■□□□□ 0.38
NCKAP1Q9Y2A7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NCKAP1Q9Y2A7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCKAP1Q9Y2A7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCKAP1Q9Y2A7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.4■□□□□ 0.38
NCKAP1Q9Y2A7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCKAP1Q9Y2A7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCKAP1Q9Y2A7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCKAP1Q9Y2A7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NCKAP1Q9Y2A7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCKAP1Q9Y2A7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.4■□□□□ 0.38
NCKAP1Q9Y2A7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
NCKAP1Q9Y2A7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.39■□□□□ 0.38
NCKAP1Q9Y2A7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
NCKAP1Q9Y2A7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NCKAP1Q9Y2A7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NCKAP1Q9Y2A7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
NCKAP1Q9Y2A7 LTB4R2-202ENST00000528054 3092 ntBASIC17.39■□□□□ 0.38
NCKAP1Q9Y2A7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
NCKAP1Q9Y2A7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.39■□□□□ 0.38
NCKAP1Q9Y2A7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NCKAP1Q9Y2A7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.39■□□□□ 0.37
NCKAP1Q9Y2A7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.39■□□□□ 0.37
NCKAP1Q9Y2A7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCKAP1Q9Y2A7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
NCKAP1Q9Y2A7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.39■□□□□ 0.37
NCKAP1Q9Y2A7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.39■□□□□ 0.37
NCKAP1Q9Y2A7 AC211486.1-202ENST00000416371 468 ntBASIC17.39■□□□□ 0.37
NCKAP1Q9Y2A7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.39■□□□□ 0.37
NCKAP1Q9Y2A7 AC211476.1-201ENST00000503899 468 ntBASIC17.39■□□□□ 0.37
NCKAP1Q9Y2A7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCKAP1Q9Y2A7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.39■□□□□ 0.37
NCKAP1Q9Y2A7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.39■□□□□ 0.37
NCKAP1Q9Y2A7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NCKAP1Q9Y2A7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NCKAP1Q9Y2A7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCKAP1Q9Y2A7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.39■□□□□ 0.37
NCKAP1Q9Y2A7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.39■□□□□ 0.37
NCKAP1Q9Y2A7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCKAP1Q9Y2A7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NCKAP1Q9Y2A7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.39■□□□□ 0.37
NCKAP1Q9Y2A7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
NCKAP1Q9Y2A7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCKAP1Q9Y2A7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCKAP1Q9Y2A7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.39■□□□□ 0.37
NCKAP1Q9Y2A7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.38■□□□□ 0.37
NCKAP1Q9Y2A7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCKAP1Q9Y2A7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCKAP1Q9Y2A7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCKAP1Q9Y2A7 PI4KAP1-204ENST00000612579 1703 ntBASIC17.38■□□□□ 0.37
NCKAP1Q9Y2A7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCKAP1Q9Y2A7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCKAP1Q9Y2A7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.38■□□□□ 0.37
NCKAP1Q9Y2A7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.38■□□□□ 0.37
NCKAP1Q9Y2A7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.38■□□□□ 0.37
NCKAP1Q9Y2A7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCKAP1Q9Y2A7 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCKAP1Q9Y2A7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCKAP1Q9Y2A7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
NCKAP1Q9Y2A7 AC018845.2-201ENST00000568326 409 ntBASIC17.38■□□□□ 0.37
NCKAP1Q9Y2A7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCKAP1Q9Y2A7 AC134684.3-201ENST00000641758 218 ntBASIC17.38■□□□□ 0.37
NCKAP1Q9Y2A7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.38■□□□□ 0.37
NCKAP1Q9Y2A7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCKAP1Q9Y2A7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.38■□□□□ 0.37
NCKAP1Q9Y2A7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCKAP1Q9Y2A7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCKAP1Q9Y2A7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCKAP1Q9Y2A7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
NCKAP1Q9Y2A7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCKAP1Q9Y2A7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCKAP1Q9Y2A7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCKAP1Q9Y2A7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.38■□□□□ 0.37
NCKAP1Q9Y2A7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
NCKAP1Q9Y2A7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCKAP1Q9Y2A7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCKAP1Q9Y2A7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NCKAP1Q9Y2A7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.37■□□□□ 0.37
NCKAP1Q9Y2A7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NCKAP1Q9Y2A7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCKAP1Q9Y2A7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NCKAP1Q9Y2A7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NCKAP1Q9Y2A7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCKAP1Q9Y2A7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCKAP1Q9Y2A7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCKAP1Q9Y2A7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
NCKAP1Q9Y2A7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.37■□□□□ 0.37
NCKAP1Q9Y2A7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.37■□□□□ 0.37
NCKAP1Q9Y2A7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.37■□□□□ 0.37
NCKAP1Q9Y2A7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms