Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE7Q9UBL6 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.84■□□□□ 0.29
CPNE7Q9UBL6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.84■□□□□ 0.29
CPNE7Q9UBL6 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CPNE7Q9UBL6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.84■□□□□ 0.29
CPNE7Q9UBL6 AC007967.2-201ENST00000432613 625 ntBASIC16.84■□□□□ 0.29
CPNE7Q9UBL6 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
CPNE7Q9UBL6 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.84■□□□□ 0.29
CPNE7Q9UBL6 IGHV3-65-201ENST00000523210 341 ntBASIC16.84■□□□□ 0.29
CPNE7Q9UBL6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE7Q9UBL6 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.84■□□□□ 0.29
CPNE7Q9UBL6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.84■□□□□ 0.29
CPNE7Q9UBL6 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
CPNE7Q9UBL6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE7Q9UBL6 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE7Q9UBL6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.84■□□□□ 0.29
CPNE7Q9UBL6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.84■□□□□ 0.29
CPNE7Q9UBL6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.84■□□□□ 0.29
CPNE7Q9UBL6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE7Q9UBL6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CPNE7Q9UBL6 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.84■□□□□ 0.29
CPNE7Q9UBL6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE7Q9UBL6 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.84■□□□□ 0.29
CPNE7Q9UBL6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE7Q9UBL6 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE7Q9UBL6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CPNE7Q9UBL6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE7Q9UBL6 AL139384.1-201ENST00000612143 3047 ntBASIC16.83■□□□□ 0.29
CPNE7Q9UBL6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 PTCHD3P3-201ENST00000403073 906 ntBASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 AC108073.2-201ENST00000464002 357 ntBASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 AC133963.1-201ENST00000504166 1679 ntBASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 RNA5SP416-201ENST00000516838 111 ntBASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE7Q9UBL6 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE7Q9UBL6 LYSMD4-203ENST00000378904 2122 ntBASIC16.82■□□□□ 0.28
CPNE7Q9UBL6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.82■□□□□ 0.28
CPNE7Q9UBL6 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.82■□□□□ 0.28
CPNE7Q9UBL6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.82■□□□□ 0.28
CPNE7Q9UBL6 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CPNE7Q9UBL6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE7Q9UBL6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE7Q9UBL6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE7Q9UBL6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.82■□□□□ 0.28
CPNE7Q9UBL6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE7Q9UBL6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.82■□□□□ 0.28
CPNE7Q9UBL6 AP002414.1-201ENST00000391405 1147 ntBASIC16.82■□□□□ 0.28
CPNE7Q9UBL6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.82■□□□□ 0.28
CPNE7Q9UBL6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE7Q9UBL6 PGAM5P1-201ENST00000518923 814 ntBASIC16.82■□□□□ 0.28
CPNE7Q9UBL6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.82■□□□□ 0.28
CPNE7Q9UBL6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.82■□□□□ 0.28
CPNE7Q9UBL6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.82■□□□□ 0.28
CPNE7Q9UBL6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CPNE7Q9UBL6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.82■□□□□ 0.28
CPNE7Q9UBL6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.82■□□□□ 0.28
CPNE7Q9UBL6 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CPNE7Q9UBL6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE7Q9UBL6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE7Q9UBL6 AL133373.2-201ENST00000623187 2828 ntBASIC16.82■□□□□ 0.28
CPNE7Q9UBL6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.82■□□□□ 0.28
CPNE7Q9UBL6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.82■□□□□ 0.28
CPNE7Q9UBL6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE7Q9UBL6 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE7Q9UBL6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE7Q9UBL6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms