Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.14■□□□□ 0.97
HMG20BQ9P0W2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HMG20BQ9P0W2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HMG20BQ9P0W2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HMG20BQ9P0W2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
HMG20BQ9P0W2 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 AC046185.3-201ENST00000623228 1824 ntBASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 MIR940-201ENST00000401276 94 ntBASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 AC005593.1-201ENST00000624894 515 ntBASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
HMG20BQ9P0W2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMG20BQ9P0W2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMG20BQ9P0W2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMG20BQ9P0W2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC21.12■□□□□ 0.97
HMG20BQ9P0W2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMG20BQ9P0W2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC21.12■□□□□ 0.97
HMG20BQ9P0W2 AL135999.2-201ENST00000622438 1686 ntBASIC21.12■□□□□ 0.97
HMG20BQ9P0W2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HMG20BQ9P0W2 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
HMG20BQ9P0W2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HMG20BQ9P0W2 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC21.12■□□□□ 0.97
HMG20BQ9P0W2 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HMG20BQ9P0W2 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMG20BQ9P0W2 AC140113.2-201ENST00000604370 208 ntBASIC21.12■□□□□ 0.97
HMG20BQ9P0W2 AC023511.2-201ENST00000618803 211 ntBASIC21.12■□□□□ 0.97
HMG20BQ9P0W2 PGM5P2-202ENST00000637225 1043 ntBASIC21.12■□□□□ 0.97
HMG20BQ9P0W2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HMG20BQ9P0W2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
HMG20BQ9P0W2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMG20BQ9P0W2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HMG20BQ9P0W2 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.12■□□□□ 0.97
HMG20BQ9P0W2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC21.12■□□□□ 0.97
HMG20BQ9P0W2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMG20BQ9P0W2 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC21.12■□□□□ 0.97
HMG20BQ9P0W2 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
HMG20BQ9P0W2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMG20BQ9P0W2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.11■□□□□ 0.97
HMG20BQ9P0W2 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMG20BQ9P0W2 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMG20BQ9P0W2 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
HMG20BQ9P0W2 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC21.11■□□□□ 0.97
HMG20BQ9P0W2 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC21.11■□□□□ 0.97
HMG20BQ9P0W2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMG20BQ9P0W2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC21.11■□□□□ 0.97
HMG20BQ9P0W2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMG20BQ9P0W2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMG20BQ9P0W2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
HMG20BQ9P0W2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC21.11■□□□□ 0.97
HMG20BQ9P0W2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMG20BQ9P0W2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
HMG20BQ9P0W2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
HMG20BQ9P0W2 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC21.11■□□□□ 0.97
HMG20BQ9P0W2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMG20BQ9P0W2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HMG20BQ9P0W2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HMG20BQ9P0W2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HMG20BQ9P0W2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HMG20BQ9P0W2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.1■□□□□ 0.97
HMG20BQ9P0W2 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
HMG20BQ9P0W2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMG20BQ9P0W2 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC21.1■□□□□ 0.97
HMG20BQ9P0W2 LYSMD4-203ENST00000378904 2122 ntBASIC21.1■□□□□ 0.97
HMG20BQ9P0W2 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMG20BQ9P0W2 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
HMG20BQ9P0W2 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC21.1■□□□□ 0.97
HMG20BQ9P0W2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC21.1■□□□□ 0.97
HMG20BQ9P0W2 FABP5-202ENST00000396359 986 ntTSL 5 BASIC21.1■□□□□ 0.97
HMG20BQ9P0W2 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC21.1■□□□□ 0.97
HMG20BQ9P0W2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
HMG20BQ9P0W2 PGAM5P1-201ENST00000518923 814 ntBASIC21.1■□□□□ 0.97
HMG20BQ9P0W2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC21.1■□□□□ 0.97
HMG20BQ9P0W2 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC21.1■□□□□ 0.97
HMG20BQ9P0W2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms