Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 AP003680.1-201ENST00000598970 3660 ntBASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 AC011551.1-201ENST00000614101 683 ntBASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 HARS-204ENST00000438307 1789 ntTSL 2 BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 LINC02012-201ENST00000608206 1725 ntBASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 AC092364.2-201ENST00000596710 2692 ntBASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CDC42SE1Q9NRR8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 AP000845.1-201ENST00000581677 2131 ntBASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 FEM1AP3-201ENST00000403722 1741 ntBASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 KRT16P6-202ENST00000425692 1426 ntBASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 SRP19-202ENST00000445150 833 ntTSL 2 BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 KRT8P36-201ENST00000489121 1440 ntBASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms