Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF41Q9H4P4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF41Q9H4P4 AC105339.3-201ENST00000560043 636 ntBASIC20.47■□□□□ 0.87
RNF41Q9H4P4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.47■□□□□ 0.87
RNF41Q9H4P4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF41Q9H4P4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.47■□□□□ 0.87
RNF41Q9H4P4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.47■□□□□ 0.87
RNF41Q9H4P4 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF41Q9H4P4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF41Q9H4P4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
RNF41Q9H4P4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RNF41Q9H4P4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF41Q9H4P4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF41Q9H4P4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
RNF41Q9H4P4 PCDHB18P-201ENST00000524813 2368 ntBASIC20.46■□□□□ 0.87
RNF41Q9H4P4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF41Q9H4P4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF41Q9H4P4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF41Q9H4P4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RNF41Q9H4P4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RNF41Q9H4P4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF41Q9H4P4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF41Q9H4P4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF41Q9H4P4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF41Q9H4P4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF41Q9H4P4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF41Q9H4P4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RNF41Q9H4P4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF41Q9H4P4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.46■□□□□ 0.87
RNF41Q9H4P4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF41Q9H4P4 KRT18P27-201ENST00000427733 1299 ntBASIC20.46■□□□□ 0.87
RNF41Q9H4P4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF41Q9H4P4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.46■□□□□ 0.87
RNF41Q9H4P4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.46■□□□□ 0.87
RNF41Q9H4P4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF41Q9H4P4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
RNF41Q9H4P4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF41Q9H4P4 MIR7706-201ENST00000613747 67 ntBASIC20.46■□□□□ 0.87
RNF41Q9H4P4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.46■□□□□ 0.87
RNF41Q9H4P4 CROCCP2-202ENST00000412962 2773 ntBASIC20.46■□□□□ 0.87
RNF41Q9H4P4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF41Q9H4P4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF41Q9H4P4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
RNF41Q9H4P4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RNF41Q9H4P4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF41Q9H4P4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF41Q9H4P4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF41Q9H4P4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
RNF41Q9H4P4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.45■□□□□ 0.87
RNF41Q9H4P4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF41Q9H4P4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF41Q9H4P4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF41Q9H4P4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF41Q9H4P4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF41Q9H4P4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF41Q9H4P4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF41Q9H4P4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF41Q9H4P4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.45■□□□□ 0.86
RNF41Q9H4P4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF41Q9H4P4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RNF41Q9H4P4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF41Q9H4P4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
RNF41Q9H4P4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF41Q9H4P4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF41Q9H4P4 AC116353.5-201ENST00000638148 1699 ntBASIC20.45■□□□□ 0.86
RNF41Q9H4P4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
RNF41Q9H4P4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.44■□□□□ 0.86
RNF41Q9H4P4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.44■□□□□ 0.86
RNF41Q9H4P4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF41Q9H4P4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.44■□□□□ 0.86
RNF41Q9H4P4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF41Q9H4P4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF41Q9H4P4 GPR89P-201ENST00000407924 1495 ntBASIC20.44■□□□□ 0.86
RNF41Q9H4P4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF41Q9H4P4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF41Q9H4P4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.44■□□□□ 0.86
RNF41Q9H4P4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RNF41Q9H4P4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
RNF41Q9H4P4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF41Q9H4P4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.44■□□□□ 0.86
RNF41Q9H4P4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF41Q9H4P4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.44■□□□□ 0.86
RNF41Q9H4P4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
RNF41Q9H4P4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.44■□□□□ 0.86
RNF41Q9H4P4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.44■□□□□ 0.86
RNF41Q9H4P4 AL049840.3-201ENST00000602669 611 ntBASIC20.44■□□□□ 0.86
RNF41Q9H4P4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
RNF41Q9H4P4 MIR1199-201ENST00000621445 119 ntBASIC20.44■□□□□ 0.86
RNF41Q9H4P4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
RNF41Q9H4P4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.44■□□□□ 0.86
RNF41Q9H4P4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.44■□□□□ 0.86
RNF41Q9H4P4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF41Q9H4P4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF41Q9H4P4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RNF41Q9H4P4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.44■□□□□ 0.86
RNF41Q9H4P4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF41Q9H4P4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.44■□□□□ 0.86
RNF41Q9H4P4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF41Q9H4P4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.43■□□□□ 0.86
RNF41Q9H4P4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms