Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS11Q9H270 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.51■□□□□ 0.39
VPS11Q9H270 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
VPS11Q9H270 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS11Q9H270 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
VPS11Q9H270 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS11Q9H270 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS11Q9H270 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.51■□□□□ 0.39
VPS11Q9H270 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.51■□□□□ 0.39
VPS11Q9H270 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS11Q9H270 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS11Q9H270 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS11Q9H270 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VPS11Q9H270 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS11Q9H270 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.51■□□□□ 0.39
VPS11Q9H270 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VPS11Q9H270 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.51■□□□□ 0.39
VPS11Q9H270 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VPS11Q9H270 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS11Q9H270 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS11Q9H270 AC092597.1-201ENST00000487352 616 ntBASIC17.51■□□□□ 0.39
VPS11Q9H270 AP003733.1-201ENST00000491725 852 ntBASIC17.51■□□□□ 0.39
VPS11Q9H270 LINC01311-201ENST00000565162 1445 ntBASIC17.51■□□□□ 0.39
VPS11Q9H270 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.51■□□□□ 0.39
VPS11Q9H270 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
VPS11Q9H270 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS11Q9H270 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS11Q9H270 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS11Q9H270 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS11Q9H270 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.51■□□□□ 0.39
VPS11Q9H270 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS11Q9H270 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.51■□□□□ 0.39
VPS11Q9H270 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS11Q9H270 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS11Q9H270 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS11Q9H270 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
VPS11Q9H270 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS11Q9H270 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.5■□□□□ 0.39
VPS11Q9H270 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS11Q9H270 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.5■□□□□ 0.39
VPS11Q9H270 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS11Q9H270 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS11Q9H270 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VPS11Q9H270 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VPS11Q9H270 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS11Q9H270 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VPS11Q9H270 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
VPS11Q9H270 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
VPS11Q9H270 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS11Q9H270 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.5■□□□□ 0.39
VPS11Q9H270 ZNF444P1-201ENST00000559497 298 ntBASIC17.5■□□□□ 0.39
VPS11Q9H270 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
VPS11Q9H270 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.5■□□□□ 0.39
VPS11Q9H270 AC011558.1-201ENST00000623459 338 ntBASIC17.5■□□□□ 0.39
VPS11Q9H270 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS11Q9H270 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.5■□□□□ 0.39
VPS11Q9H270 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS11Q9H270 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.5■□□□□ 0.39
VPS11Q9H270 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VPS11Q9H270 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VPS11Q9H270 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
VPS11Q9H270 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.5■□□□□ 0.39
VPS11Q9H270 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS11Q9H270 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
VPS11Q9H270 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS11Q9H270 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VPS11Q9H270 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.5■□□□□ 0.39
VPS11Q9H270 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VPS11Q9H270 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VPS11Q9H270 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.49■□□□□ 0.39
VPS11Q9H270 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VPS11Q9H270 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.49■□□□□ 0.39
VPS11Q9H270 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VPS11Q9H270 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
VPS11Q9H270 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VPS11Q9H270 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VPS11Q9H270 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VPS11Q9H270 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
VPS11Q9H270 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VPS11Q9H270 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.49■□□□□ 0.39
VPS11Q9H270 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.49■□□□□ 0.39
VPS11Q9H270 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
VPS11Q9H270 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VPS11Q9H270 IGHGP-201ENST00000390555 1178 ntBASIC17.49■□□□□ 0.39
VPS11Q9H270 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VPS11Q9H270 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.49■□□□□ 0.39
VPS11Q9H270 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.49■□□□□ 0.39
VPS11Q9H270 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.49■□□□□ 0.39
VPS11Q9H270 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
VPS11Q9H270 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.49■□□□□ 0.39
VPS11Q9H270 MTCL1P1-201ENST00000446207 792 ntBASIC17.49■□□□□ 0.39
VPS11Q9H270 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VPS11Q9H270 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.49■□□□□ 0.39
VPS11Q9H270 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
VPS11Q9H270 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.49■□□□□ 0.39
VPS11Q9H270 AL353692.3-201ENST00000407031 1396 ntBASIC17.49■□□□□ 0.39
VPS11Q9H270 LINC02012-201ENST00000608206 1725 ntBASIC17.49■□□□□ 0.39
VPS11Q9H270 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VPS11Q9H270 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.49■□□□□ 0.39
VPS11Q9H270 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms