Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 UGDH-203ENST00000503779 575 ntTSL 419.74■□□□□ 0.757e-20■■□□□ 14
XRN2Q9H0D6 UGDH-207ENST00000509391 577 ntTSL 319.74■□□□□ 0.757e-20■■□□□ 14
XRN2Q9H0D6 UGDH-210ENST00000514106 568 ntTSL 418.77■□□□□ 0.67e-20■■□□□ 14
XRN2Q9H0D6 UGDH-212ENST00000515398 584 ntTSL 518.77■□□□□ 0.67e-20■■□□□ 14
XRN2Q9H0D6 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.123e-6■■□□□ 14
XRN2Q9H0D6 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC7.94□□□□□ -1.143e-6■■□□□ 14
XRN2Q9H0D6 UGDH-209ENST00000510881 549 ntTSL 35.69□□□□□ -1.57e-20■■□□□ 14
XRN2Q9H0D6 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.6□□□□□ -1.513e-6■■□□□ 14
XRN2Q9H0D6 UGDH-204ENST00000505698 433 ntTSL 45.38□□□□□ -1.557e-20■■□□□ 14
XRN2Q9H0D6 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.63e-6■■□□□ 14
XRN2Q9H0D6 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC12.98□□□□□ -0.335e-7■■□□□ 14
XRN2Q9H0D6 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.279e-7■■□□□ 14
XRN2Q9H0D6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.583e-6■■□□□ 14
XRN2Q9H0D6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.583e-6■■□□□ 14
XRN2Q9H0D6 LGALS3BP-206ENST00000587310 768 ntTSL 219.44■□□□□ 0.79e-10■■□□□ 14
XRN2Q9H0D6 LGALS3BP-207ENST00000587311 1905 ntTSL 218.55■□□□□ 0.569e-10■■□□□ 14
XRN2Q9H0D6 LGALS3BP-215ENST00000589775 893 ntTSL 318.3■□□□□ 0.529e-10■■□□□ 14
XRN2Q9H0D6 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.69■□□□□ 0.429e-10■■□□□ 14
XRN2Q9H0D6 LGALS3BP-204ENST00000586720 1736 ntTSL 517.5■□□□□ 0.399e-10■■□□□ 14
XRN2Q9H0D6 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.26■□□□□ 0.359e-10■■□□□ 14
XRN2Q9H0D6 LGALS3BP-205ENST00000587251 2091 ntTSL 516.84■□□□□ 0.299e-10■■□□□ 14
XRN2Q9H0D6 LGALS3BP-208ENST00000588198 1132 ntTSL 216.02■□□□□ 0.169e-10■■□□□ 14
XRN2Q9H0D6 LGALS3BP-216ENST00000589906 540 ntTSL 315.82■□□□□ 0.129e-10■■□□□ 14
XRN2Q9H0D6 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.429e-10■■□□□ 14
XRN2Q9H0D6 BRD2-204ENST00000449025 3210 ntAPPRIS ALT2 TSL 1 (best)12.04□□□□□ -0.481e-6■■□□□ 14
XRN2Q9H0D6 BRD2-205ENST00000449085 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.481e-6■■□□□ 14
XRN2Q9H0D6 SH3BP4-205ENST00000444916 570 ntTSL 416.7■□□□□ 0.264e-7■■□□□ 14
XRN2Q9H0D6 SH3BP4-206ENST00000446904 829 ntTSL 312.51□□□□□ -0.414e-7■■□□□ 14
XRN2Q9H0D6 SH3BP4-207ENST00000454947 500 ntTSL 410.59□□□□□ -0.714e-7■■□□□ 14
XRN2Q9H0D6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.932e-6■■□□□ 14
XRN2Q9H0D6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.512e-6■■□□□ 14
XRN2Q9H0D6 LTBP3-210ENST00000528516 3935 ntTSL 1 (best)17.33■□□□□ 0.362e-6■■□□□ 14
XRN2Q9H0D6 LTBP3-218ENST00000530866 3756 ntTSL 212.52□□□□□ -0.42e-6■■□□□ 14
XRN2Q9H0D6 KLHL23-206ENST00000498202 843 ntTSL 322.31■■□□□ 1.161e-7■■□□□ 14
XRN2Q9H0D6 SOS1-204ENST00000451331 579 ntTSL 419.12■□□□□ 0.651e-6■■□□□ 14
XRN2Q9H0D6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.641e-7■■□□□ 14
XRN2Q9H0D6 KLHL23-202ENST00000392647 4077 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.321e-7■■□□□ 14
XRN2Q9H0D6 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.48□□□□□ -1.691e-6■■□□□ 14
XRN2Q9H0D6 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.4□□□□□ -1.711e-7■■□□□ 14
XRN2Q9H0D6 RBM14-209ENST00000512283 567 ntTSL 421.87■■□□□ 1.091e-8■■□□□ 14
XRN2Q9H0D6 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC16.48■□□□□ 0.231e-8■■□□□ 14
XRN2Q9H0D6 RBM14-205ENST00000443702 732 ntTSL 3 BASIC15.39■□□□□ 0.051e-8■■□□□ 14
XRN2Q9H0D6 RBM14-203ENST00000409372 876 ntTSL 2 BASIC14.49□□□□□ -0.091e-8■■□□□ 14
XRN2Q9H0D6 NAP1L4-203ENST00000430811 860 ntTSL 230.69■■■□□ 2.59e-7■■□□□ 14
XRN2Q9H0D6 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.069e-7■■□□□ 13.9
XRN2Q9H0D6 SIRT7-210ENST00000572902 909 ntTSL 324.88■■□□□ 1.578e-8■■□□□ 13.9
XRN2Q9H0D6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.289e-15■■□□□ 13.9
XRN2Q9H0D6 RNF220-201ENST00000335497 1203 ntTSL 531.55■■■□□ 2.645e-6■■□□□ 13.9
XRN2Q9H0D6 MAPK12-204ENST00000467891 2019 ntTSL 529.97■■■□□ 2.392e-15■■□□□ 13.9
XRN2Q9H0D6 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.22e-15■■□□□ 13.9
XRN2Q9H0D6 RNF220-208ENST00000471494 720 ntTSL 527.94■■■□□ 2.065e-6■■□□□ 13.9
XRN2Q9H0D6 MAPK12-206ENST00000488504 1785 ntTSL 524.45■■□□□ 1.52e-15■■□□□ 13.9
XRN2Q9H0D6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.85■■□□□ 1.412e-15■■□□□ 13.9
XRN2Q9H0D6 RNF220-205ENST00000440132 1200 ntTSL 222.67■■□□□ 1.225e-6■■□□□ 13.9
XRN2Q9H0D6 RNF220-212ENST00000475378 916 ntTSL 322.49■■□□□ 1.195e-6■■□□□ 13.9
XRN2Q9H0D6 RNF220-209ENST00000474064 2734 ntTSL 221.56■■□□□ 1.045e-6■■□□□ 13.9
XRN2Q9H0D6 RNF220-218ENST00000497469 590 ntTSL 218.72■□□□□ 0.595e-6■■□□□ 13.9
XRN2Q9H0D6 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.5■□□□□ 0.232e-15■■□□□ 13.9
XRN2Q9H0D6 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.66■□□□□ 0.12e-15■■□□□ 13.9
XRN2Q9H0D6 MAPK12-202ENST00000395778 605 ntTSL 1 (best) BASIC13.61□□□□□ -0.232e-15■■□□□ 13.9
XRN2Q9H0D6 VWCE-201ENST00000301770 3368 ntTSL 1 (best)14.28□□□□□ -0.123e-6■■□□□ 13.9
XRN2Q9H0D6 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.173e-6■■□□□ 13.9
XRN2Q9H0D6 GUK1-225ENST00000481341 333 ntTSL 317.47■□□□□ 0.392e-10■■□□□ 13.9
XRN2Q9H0D6 HIPK2-201ENST00000342645 2937 ntTSL 5 BASIC8.67□□□□□ -1.026e-6■■□□□ 13.9
XRN2Q9H0D6 GDPD5-213ENST00000532435 825 ntTSL 526.68■■□□□ 1.862e-9■■□□□ 13.9
XRN2Q9H0D6 SLC12A4-208ENST00000572010 1016 ntTSL 1 (best)25.97■■□□□ 1.752e-9■■□□□ 13.9
XRN2Q9H0D6 SLC12A4-217ENST00000576462 673 ntTSL 224.4■■□□□ 1.52e-9■■□□□ 13.9
XRN2Q9H0D6 GDPD5-208ENST00000529095 1201 ntTSL 1 (best)21.19■□□□□ 0.982e-9■■□□□ 13.9
XRN2Q9H0D6 SLC12A4-207ENST00000571299 891 ntTSL 319.69■□□□□ 0.742e-9■■□□□ 13.9
XRN2Q9H0D6 SLC12A4-216ENST00000576377 868 ntTSL 519.36■□□□□ 0.692e-9■■□□□ 13.9
XRN2Q9H0D6 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.64■□□□□ 0.252e-9■■□□□ 13.9
XRN2Q9H0D6 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.252e-9■■□□□ 13.9
XRN2Q9H0D6 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.412e-9■■□□□ 13.9
XRN2Q9H0D6 NKD1-202ENST00000564336 477 ntTSL 326.98■■□□□ 1.911e-7■■□□□ 13.9
XRN2Q9H0D6 USP7-219ENST00000569230 569 ntTSL 56.09□□□□□ -1.431e-7■■□□□ 13.9
XRN2Q9H0D6 NFE2L2-205ENST00000430047 451 ntTSL 327.21■■□□□ 1.955e-10■■□□□ 13.9
XRN2Q9H0D6 NFE2L2-210ENST00000462023 521 ntTSL 218.67■□□□□ 0.585e-10■■□□□ 13.9
XRN2Q9H0D6 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.57□□□□□ -0.085e-10■■□□□ 13.9
XRN2Q9H0D6 NFE2L2-211ENST00000464747 2749 ntTSL 2 BASIC11.95□□□□□ -0.55e-10■■□□□ 13.9
XRN2Q9H0D6 NFE2L2-214ENST00000588123 814 ntTSL 510.99□□□□□ -0.655e-10■■□□□ 13.9
XRN2Q9H0D6 NFE2L2-213ENST00000586532 942 ntTSL 54.64□□□□□ -1.675e-10■■□□□ 13.9
XRN2Q9H0D6 WDR43-202ENST00000407426 3533 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.439e-7■■□□□ 13.9
XRN2Q9H0D6 DLG1-204ENST00000392381 2833 ntTSL 1 (best)21.12■□□□□ 0.972e-11■■□□□ 13.9
XRN2Q9H0D6 DLG1-207ENST00000419227 1771 ntTSL 217.11■□□□□ 0.332e-11■■□□□ 13.9
XRN2Q9H0D6 DLG1-209ENST00000419553 582 ntTSL 214.77□□□□□ -0.052e-11■■□□□ 13.9
XRN2Q9H0D6 DLG1-205ENST00000392382 2690 ntTSL 5 BASIC12.48□□□□□ -0.412e-11■■□□□ 13.9
XRN2Q9H0D6 DLG1-215ENST00000448528 2977 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.642e-11■■□□□ 13.9
XRN2Q9H0D6 DLG1-201ENST00000346964 5034 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.682e-11■■□□□ 13.9
XRN2Q9H0D6 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.042e-11■■□□□ 13.9
XRN2Q9H0D6 DLG1-208ENST00000419354 3994 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.052e-11■■□□□ 13.9
XRN2Q9H0D6 DLG1-223ENST00000471733 2605 ntTSL 1 (best)8.27□□□□□ -1.092e-11■■□□□ 13.9
XRN2Q9H0D6 PTBP1-215ENST00000589883 683 ntTSL 323.22■■□□□ 1.313e-9■■□□□ 13.8
XRN2Q9H0D6 MICALL2-202ENST00000413446 3046 ntTSL 213.43□□□□□ -0.264e-7■■□□□ 13.8
XRN2Q9H0D6 ZNF276-206ENST00000563983 3403 ntTSL 211.85□□□□□ -0.512e-6■■□□□ 13.8
XRN2Q9H0D6 MYBBP1A-206ENST00000572759 588 ntTSL 319.75■□□□□ 0.753e-6■■□□□ 13.8
XRN2Q9H0D6 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.49e-8■■□□□ 13.8
XRN2Q9H0D6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.329e-8■■□□□ 13.8
XRN2Q9H0D6 GPRC5C-211ENST00000582873 393 ntTSL 328.49■■■□□ 2.153e-13■■□□□ 13.8
XRN2Q9H0D6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC27.4■■□□□ 1.985e-6■■□□□ 13.8
XRN2Q9H0D6 GPRC5C-203ENST00000392628 1529 ntAPPRIS ALT2 TSL 523.54■■□□□ 1.363e-13■■□□□ 13.8
Retrieved 100 of 21,068 protein–RNA pairs in 158.8 ms