Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 MKNK2P1-201ENST00000437526 628 ntBASIC18.09■□□□□ 0.49
LRRC3Q9BY71 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 ABALON-201ENST00000629058 1903 ntBASIC18.09■□□□□ 0.49
LRRC3Q9BY71 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 PI4KAP1-204ENST00000612579 1703 ntBASIC18.09■□□□□ 0.49
LRRC3Q9BY71 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC3Q9BY71 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRRC3Q9BY71 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.08■□□□□ 0.49
LRRC3Q9BY71 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.08■□□□□ 0.49
LRRC3Q9BY71 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LRRC3Q9BY71 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
LRRC3Q9BY71 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRRC3Q9BY71 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LRRC3Q9BY71 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.08■□□□□ 0.49
LRRC3Q9BY71 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.08■□□□□ 0.49
LRRC3Q9BY71 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.08■□□□□ 0.49
LRRC3Q9BY71 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC3Q9BY71 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
LRRC3Q9BY71 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
LRRC3Q9BY71 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC3Q9BY71 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.08■□□□□ 0.48
LRRC3Q9BY71 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC3Q9BY71 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
LRRC3Q9BY71 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.08■□□□□ 0.48
LRRC3Q9BY71 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.08■□□□□ 0.48
LRRC3Q9BY71 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
LRRC3Q9BY71 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.08■□□□□ 0.48
LRRC3Q9BY71 AL078644.1-201ENST00000609881 752 ntBASIC18.08■□□□□ 0.48
LRRC3Q9BY71 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.08■□□□□ 0.48
LRRC3Q9BY71 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC3Q9BY71 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC3Q9BY71 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.48
LRRC3Q9BY71 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC3Q9BY71 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC3Q9BY71 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC3Q9BY71 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC3Q9BY71 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC3Q9BY71 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC3Q9BY71 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC3Q9BY71 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC3Q9BY71 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC3Q9BY71 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC3Q9BY71 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC3Q9BY71 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LRRC3Q9BY71 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
LRRC3Q9BY71 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC3Q9BY71 BCAR1-209ENST00000546196 1340 ntBASIC18.07■□□□□ 0.48
LRRC3Q9BY71 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LRRC3Q9BY71 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC3Q9BY71 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC3Q9BY71 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.07■□□□□ 0.48
LRRC3Q9BY71 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC3Q9BY71 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC3Q9BY71 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC3Q9BY71 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
LRRC3Q9BY71 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
LRRC3Q9BY71 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.07■□□□□ 0.48
LRRC3Q9BY71 AL596442.2-201ENST00000610240 980 ntBASIC18.07■□□□□ 0.48
LRRC3Q9BY71 AL139327.4-201ENST00000612362 153 ntBASIC18.07■□□□□ 0.48
LRRC3Q9BY71 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.07■□□□□ 0.48
LRRC3Q9BY71 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
LRRC3Q9BY71 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LRRC3Q9BY71 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC3Q9BY71 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.07■□□□□ 0.48
LRRC3Q9BY71 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LRRC3Q9BY71 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.07■□□□□ 0.48
LRRC3Q9BY71 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC3Q9BY71 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LRRC3Q9BY71 AC138932.1-201ENST00000534164 6830 ntBASIC18.06■□□□□ 0.48
LRRC3Q9BY71 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
LRRC3Q9BY71 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRC3Q9BY71 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LRRC3Q9BY71 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRC3Q9BY71 ELL2P1-201ENST00000413990 1906 ntBASIC18.06■□□□□ 0.48
LRRC3Q9BY71 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRC3Q9BY71 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.06■□□□□ 0.48
LRRC3Q9BY71 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.06■□□□□ 0.48
LRRC3Q9BY71 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC3Q9BY71 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC3Q9BY71 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRC3Q9BY71 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms