Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.27
SHANK2-AS3Q9BTD1 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
SHANK2-AS3Q9BTD1 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.4□□□□□ -0.27
SHANK2-AS3Q9BTD1 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.27
SHANK2-AS3Q9BTD1 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 PCDHA14-201ENST00000506751 2298 ntBASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 AC007967.3-201ENST00000434308 558 ntBASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 AC112907.2-201ENST00000448639 330 ntBASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 KRT18P38-201ENST00000449496 1282 ntBASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 VENTXP5-201ENST00000523979 775 ntBASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 RNF126P1-202ENST00000569893 925 ntBASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 AC092053.1-201ENST00000605787 1936 ntBASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.39□□□□□ -0.27
SHANK2-AS3Q9BTD1 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 AC124947.2-201ENST00000547118 1133 ntBASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 HYMAI.1-201ENST00000620949 238 ntBASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 AC133561.5-201ENST00000635547 218 ntBASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 AC073508.3-201ENST00000619697 1419 ntBASIC13.38□□□□□ -0.27
SHANK2-AS3Q9BTD1 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms