Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC108751.1-201ENST00000490852 363 ntBASIC18.18■□□□□ 0.5
SMOQ99835 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMOQ99835 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.18■□□□□ 0.5
SMOQ99835 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMOQ99835 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.18■□□□□ 0.5
SMOQ99835 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.18■□□□□ 0.5
SMOQ99835 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.18■□□□□ 0.5
SMOQ99835 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMOQ99835 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMOQ99835 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SMOQ99835 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMOQ99835 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.18■□□□□ 0.5
SMOQ99835 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMOQ99835 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMOQ99835 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.17■□□□□ 0.5
SMOQ99835 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.17■□□□□ 0.5
SMOQ99835 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMOQ99835 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMOQ99835 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMOQ99835 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMOQ99835 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SMOQ99835 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMOQ99835 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMOQ99835 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.17■□□□□ 0.5
SMOQ99835 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMOQ99835 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.17■□□□□ 0.5
SMOQ99835 AC108073.2-201ENST00000464002 357 ntBASIC18.17■□□□□ 0.5
SMOQ99835 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SMOQ99835 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMOQ99835 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.17■□□□□ 0.5
SMOQ99835 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SMOQ99835 TERC-201ENST00000602385 541 ntBASIC18.17■□□□□ 0.5
SMOQ99835 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SMOQ99835 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
SMOQ99835 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.17■□□□□ 0.5
SMOQ99835 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMOQ99835 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.17■□□□□ 0.5
SMOQ99835 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.17■□□□□ 0.5
SMOQ99835 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMOQ99835 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMOQ99835 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMOQ99835 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.17■□□□□ 0.5
SMOQ99835 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMOQ99835 PCDHB18P-201ENST00000524813 2368 ntBASIC18.17■□□□□ 0.5
SMOQ99835 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMOQ99835 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMOQ99835 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.17■□□□□ 0.5
SMOQ99835 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.17■□□□□ 0.5
SMOQ99835 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.17■□□□□ 0.5
SMOQ99835 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMOQ99835 ZNF259P1-201ENST00000407656 1365 ntBASIC18.17■□□□□ 0.5
SMOQ99835 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.17■□□□□ 0.5
SMOQ99835 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMOQ99835 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMOQ99835 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMOQ99835 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.16■□□□□ 0.5
SMOQ99835 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMOQ99835 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SMOQ99835 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.16■□□□□ 0.5
SMOQ99835 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SMOQ99835 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMOQ99835 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.16■□□□□ 0.5
SMOQ99835 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.16■□□□□ 0.5
SMOQ99835 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.16■□□□□ 0.5
SMOQ99835 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.16■□□□□ 0.5
SMOQ99835 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.16■□□□□ 0.5
SMOQ99835 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.16■□□□□ 0.5
SMOQ99835 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SMOQ99835 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.16■□□□□ 0.5
SMOQ99835 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMOQ99835 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMOQ99835 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMOQ99835 AC005332.8-201ENST00000622750 2735 ntBASIC18.16■□□□□ 0.5
SMOQ99835 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.16■□□□□ 0.5
SMOQ99835 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMOQ99835 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMOQ99835 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SMOQ99835 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.16■□□□□ 0.5
SMOQ99835 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMOQ99835 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SMOQ99835 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMOQ99835 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SMOQ99835 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMOQ99835 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SMOQ99835 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
SMOQ99835 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMOQ99835 AC116353.5-201ENST00000638148 1699 ntBASIC18.15■□□□□ 0.5
SMOQ99835 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.15■□□□□ 0.5
SMOQ99835 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMOQ99835 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMOQ99835 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMOQ99835 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
SMOQ99835 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMOQ99835 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMOQ99835 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMOQ99835 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.15■□□□□ 0.5
SMOQ99835 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMOQ99835 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMOQ99835 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMOQ99835 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms