Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SCAF11Q99590 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SCAF11Q99590 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SCAF11Q99590 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC24.73■■□□□ 1.55
SCAF11Q99590 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC24.73■■□□□ 1.55
SCAF11Q99590 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC24.73■■□□□ 1.55
SCAF11Q99590 RAB34-224ENST00000636513 888 ntTSL 5 BASIC24.73■■□□□ 1.55
SCAF11Q99590 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SCAF11Q99590 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SCAF11Q99590 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SCAF11Q99590 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC24.73■■□□□ 1.55
SCAF11Q99590 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC24.73■■□□□ 1.55
SCAF11Q99590 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC24.73■■□□□ 1.55
SCAF11Q99590 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
SCAF11Q99590 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC24.72■■□□□ 1.55
SCAF11Q99590 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
SCAF11Q99590 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
SCAF11Q99590 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SCAF11Q99590 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SCAF11Q99590 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC24.72■■□□□ 1.55
SCAF11Q99590 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC24.72■■□□□ 1.55
SCAF11Q99590 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SCAF11Q99590 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC24.72■■□□□ 1.55
SCAF11Q99590 REXO1L11P-201ENST00000620964 1927 ntBASIC24.72■■□□□ 1.55
SCAF11Q99590 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SCAF11Q99590 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC24.72■■□□□ 1.55
SCAF11Q99590 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC24.72■■□□□ 1.55
SCAF11Q99590 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC24.72■■□□□ 1.55
SCAF11Q99590 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC24.72■■□□□ 1.55
SCAF11Q99590 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SCAF11Q99590 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC24.72■■□□□ 1.55
SCAF11Q99590 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SCAF11Q99590 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
SCAF11Q99590 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
SCAF11Q99590 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SCAF11Q99590 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC24.72■■□□□ 1.55
SCAF11Q99590 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC24.72■■□□□ 1.55
SCAF11Q99590 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC24.72■■□□□ 1.55
SCAF11Q99590 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
SCAF11Q99590 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC24.71■■□□□ 1.55
SCAF11Q99590 RBPMS2P1-201ENST00000437762 623 ntBASIC24.71■■□□□ 1.55
SCAF11Q99590 AC107918.2-201ENST00000530817 355 ntBASIC24.71■■□□□ 1.55
SCAF11Q99590 SPDYE22P-201ENST00000582158 798 ntBASIC24.71■■□□□ 1.55
SCAF11Q99590 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC24.71■■□□□ 1.55
SCAF11Q99590 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC24.71■■□□□ 1.55
SCAF11Q99590 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC24.71■■□□□ 1.55
SCAF11Q99590 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SCAF11Q99590 AKAP8P1-201ENST00000434743 1349 ntBASIC24.71■■□□□ 1.55
SCAF11Q99590 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC24.71■■□□□ 1.55
SCAF11Q99590 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SCAF11Q99590 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
SCAF11Q99590 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
SCAF11Q99590 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC24.71■■□□□ 1.55
SCAF11Q99590 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
SCAF11Q99590 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC24.71■■□□□ 1.55
SCAF11Q99590 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC24.71■■□□□ 1.55
SCAF11Q99590 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
SCAF11Q99590 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC24.71■■□□□ 1.55
SCAF11Q99590 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SCAF11Q99590 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SCAF11Q99590 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
SCAF11Q99590 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
SCAF11Q99590 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SCAF11Q99590 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
SCAF11Q99590 MYCLP1-201ENST00000372451 1075 ntBASIC24.7■■□□□ 1.55
SCAF11Q99590 SPCS2P4-201ENST00000436160 681 ntBASIC24.7■■□□□ 1.55
SCAF11Q99590 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC24.7■■□□□ 1.55
SCAF11Q99590 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC24.7■■□□□ 1.55
SCAF11Q99590 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC24.7■■□□□ 1.55
SCAF11Q99590 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
SCAF11Q99590 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
SCAF11Q99590 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.55
SCAF11Q99590 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
SCAF11Q99590 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC24.7■■□□□ 1.55
SCAF11Q99590 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SCAF11Q99590 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC24.7■■□□□ 1.54
SCAF11Q99590 AC135050.7-201ENST00000624508 2218 ntBASIC24.7■■□□□ 1.54
SCAF11Q99590 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
SCAF11Q99590 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC24.7■■□□□ 1.54
SCAF11Q99590 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SCAF11Q99590 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
SCAF11Q99590 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
SCAF11Q99590 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SCAF11Q99590 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SCAF11Q99590 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SCAF11Q99590 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
SCAF11Q99590 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC24.7■■□□□ 1.54
SCAF11Q99590 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC24.7■■□□□ 1.54
SCAF11Q99590 NAA50-208ENST00000497255 789 ntTSL 5 BASIC24.7■■□□□ 1.54
SCAF11Q99590 IGHV3-42-201ENST00000520410 361 ntBASIC24.7■■□□□ 1.54
SCAF11Q99590 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.54
SCAF11Q99590 COQ6-210ENST00000554920 649 ntTSL 3 BASIC24.7■■□□□ 1.54
SCAF11Q99590 AL008721.1-201ENST00000609964 604 ntBASIC24.7■■□□□ 1.54
SCAF11Q99590 AL645728.2-201ENST00000641974 660 ntBASIC24.7■■□□□ 1.54
SCAF11Q99590 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC24.7■■□□□ 1.54
SCAF11Q99590 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC24.7■■□□□ 1.54
SCAF11Q99590 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC24.69■■□□□ 1.54
SCAF11Q99590 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC24.69■■□□□ 1.54
SCAF11Q99590 AC008677.1-201ENST00000519230 1561 ntBASIC24.69■■□□□ 1.54
SCAF11Q99590 HARS-203ENST00000431330 1774 ntTSL 2 BASIC24.69■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms