Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
YME1L1Q96TA2 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.57■□□□□ 0.56
YME1L1Q96TA2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
YME1L1Q96TA2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
YME1L1Q96TA2 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
YME1L1Q96TA2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.57■□□□□ 0.56
YME1L1Q96TA2 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
YME1L1Q96TA2 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
YME1L1Q96TA2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.57■□□□□ 0.56
YME1L1Q96TA2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.57■□□□□ 0.56
YME1L1Q96TA2 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
YME1L1Q96TA2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
YME1L1Q96TA2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
YME1L1Q96TA2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
YME1L1Q96TA2 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
YME1L1Q96TA2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.56■□□□□ 0.56
YME1L1Q96TA2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
YME1L1Q96TA2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
YME1L1Q96TA2 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
YME1L1Q96TA2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
YME1L1Q96TA2 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
YME1L1Q96TA2 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
YME1L1Q96TA2 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
YME1L1Q96TA2 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.56■□□□□ 0.56
YME1L1Q96TA2 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.56■□□□□ 0.56
YME1L1Q96TA2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.56■□□□□ 0.56
YME1L1Q96TA2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
YME1L1Q96TA2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.56■□□□□ 0.56
YME1L1Q96TA2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.56■□□□□ 0.56
YME1L1Q96TA2 DUX4L27-201ENST00000554796 1261 ntBASIC18.56■□□□□ 0.56
YME1L1Q96TA2 AJ011932.1-201ENST00000621707 465 ntBASIC18.56■□□□□ 0.56
YME1L1Q96TA2 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
YME1L1Q96TA2 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
YME1L1Q96TA2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
YME1L1Q96TA2 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
YME1L1Q96TA2 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.56■□□□□ 0.56
YME1L1Q96TA2 AP000997.3-201ENST00000623333 2250 ntBASIC18.56■□□□□ 0.56
YME1L1Q96TA2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
YME1L1Q96TA2 AC046185.3-201ENST00000623228 1824 ntBASIC18.56■□□□□ 0.56
YME1L1Q96TA2 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
YME1L1Q96TA2 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
YME1L1Q96TA2 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 AL135999.2-201ENST00000622438 1686 ntBASIC18.55■□□□□ 0.56
YME1L1Q96TA2 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.55■□□□□ 0.56
YME1L1Q96TA2 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 CNN2P2-201ENST00000443536 909 ntBASIC18.55■□□□□ 0.56
YME1L1Q96TA2 CNN2P3-201ENST00000450201 906 ntBASIC18.55■□□□□ 0.56
YME1L1Q96TA2 AC087163.2-201ENST00000457299 853 ntBASIC18.55■□□□□ 0.56
YME1L1Q96TA2 SLC25A6P2-201ENST00000497974 877 ntBASIC18.55■□□□□ 0.56
YME1L1Q96TA2 KRT8P48-201ENST00000515599 1220 ntBASIC18.55■□□□□ 0.56
YME1L1Q96TA2 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 AL136317.3-201ENST00000618497 906 ntBASIC18.55■□□□□ 0.56
YME1L1Q96TA2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
YME1L1Q96TA2 WIZP1-201ENST00000531444 2299 ntBASIC18.54■□□□□ 0.56
YME1L1Q96TA2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
YME1L1Q96TA2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.54■□□□□ 0.56
YME1L1Q96TA2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
YME1L1Q96TA2 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
YME1L1Q96TA2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
YME1L1Q96TA2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
YME1L1Q96TA2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
YME1L1Q96TA2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
YME1L1Q96TA2 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
YME1L1Q96TA2 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
YME1L1Q96TA2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
YME1L1Q96TA2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
YME1L1Q96TA2 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.54■□□□□ 0.56
YME1L1Q96TA2 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
YME1L1Q96TA2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
YME1L1Q96TA2 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.54■□□□□ 0.56
YME1L1Q96TA2 AL592309.1-201ENST00000443127 649 ntBASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms