Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CNKSR1Q969H4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNKSR1Q969H4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CNKSR1Q969H4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CNKSR1Q969H4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNKSR1Q969H4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNKSR1Q969H4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNKSR1Q969H4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CNKSR1Q969H4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNKSR1Q969H4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNKSR1Q969H4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CNKSR1Q969H4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CNKSR1Q969H4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CNKSR1Q969H4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNKSR1Q969H4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNKSR1Q969H4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC21.09■□□□□ 0.97
CNKSR1Q969H4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNKSR1Q969H4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC21.09■□□□□ 0.97
CNKSR1Q969H4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC21.09■□□□□ 0.97
CNKSR1Q969H4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CNKSR1Q969H4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNKSR1Q969H4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC21.09■□□□□ 0.97
CNKSR1Q969H4 CRB3P1-201ENST00000449338 276 ntBASIC21.09■□□□□ 0.97
CNKSR1Q969H4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC21.09■□□□□ 0.97
CNKSR1Q969H4 AC027307.3-201ENST00000594262 1100 ntBASIC21.09■□□□□ 0.97
CNKSR1Q969H4 REXO1L9P-201ENST00000604264 2108 ntBASIC21.09■□□□□ 0.97
CNKSR1Q969H4 AL139327.4-201ENST00000612362 153 ntBASIC21.09■□□□□ 0.97
CNKSR1Q969H4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNKSR1Q969H4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CNKSR1Q969H4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNKSR1Q969H4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CNKSR1Q969H4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNKSR1Q969H4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNKSR1Q969H4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CNKSR1Q969H4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC21.09■□□□□ 0.97
CNKSR1Q969H4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.09■□□□□ 0.97
CNKSR1Q969H4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNKSR1Q969H4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CNKSR1Q969H4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CNKSR1Q969H4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNKSR1Q969H4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNKSR1Q969H4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNKSR1Q969H4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.08■□□□□ 0.97
CNKSR1Q969H4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNKSR1Q969H4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNKSR1Q969H4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC21.08■□□□□ 0.97
CNKSR1Q969H4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.08■□□□□ 0.97
CNKSR1Q969H4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC21.08■□□□□ 0.97
CNKSR1Q969H4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNKSR1Q969H4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.08■□□□□ 0.97
CNKSR1Q969H4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.08■□□□□ 0.97
CNKSR1Q969H4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNKSR1Q969H4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNKSR1Q969H4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CNKSR1Q969H4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC21.08■□□□□ 0.97
CNKSR1Q969H4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNKSR1Q969H4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC21.08■□□□□ 0.97
CNKSR1Q969H4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNKSR1Q969H4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNKSR1Q969H4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC21.08■□□□□ 0.97
CNKSR1Q969H4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC21.08■□□□□ 0.97
CNKSR1Q969H4 CR383656.12-201ENST00000549567 513 ntBASIC21.08■□□□□ 0.97
CNKSR1Q969H4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
CNKSR1Q969H4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC21.08■□□□□ 0.97
CNKSR1Q969H4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC21.08■□□□□ 0.97
CNKSR1Q969H4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNKSR1Q969H4 MIR6080-201ENST00000617359 66 ntBASIC21.08■□□□□ 0.97
CNKSR1Q969H4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC21.08■□□□□ 0.97
CNKSR1Q969H4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC21.08■□□□□ 0.97
CNKSR1Q969H4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC21.08■□□□□ 0.97
CNKSR1Q969H4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CNKSR1Q969H4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.08■□□□□ 0.96
CNKSR1Q969H4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
CNKSR1Q969H4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CNKSR1Q969H4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.08■□□□□ 0.96
CNKSR1Q969H4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
CNKSR1Q969H4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.96
CNKSR1Q969H4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNKSR1Q969H4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNKSR1Q969H4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CNKSR1Q969H4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC21.07■□□□□ 0.96
CNKSR1Q969H4 AC109635.5-201ENST00000533593 962 ntBASIC21.07■□□□□ 0.96
CNKSR1Q969H4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC21.07■□□□□ 0.96
CNKSR1Q969H4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC21.07■□□□□ 0.96
CNKSR1Q969H4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CNKSR1Q969H4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNKSR1Q969H4 AC012569.1-201ENST00000591191 1524 ntBASIC21.07■□□□□ 0.96
CNKSR1Q969H4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CNKSR1Q969H4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.07■□□□□ 0.96
CNKSR1Q969H4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CNKSR1Q969H4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.07■□□□□ 0.96
CNKSR1Q969H4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CNKSR1Q969H4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CNKSR1Q969H4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.06■□□□□ 0.96
CNKSR1Q969H4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNKSR1Q969H4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNKSR1Q969H4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNKSR1Q969H4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNKSR1Q969H4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21.06■□□□□ 0.96
CNKSR1Q969H4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms