Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00311Q8N616 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00311Q8N616 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00311Q8N616 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00311Q8N616 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LINC00311Q8N616 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LINC00311Q8N616 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00311Q8N616 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00311Q8N616 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC00311Q8N616 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC00311Q8N616 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC00311Q8N616 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC00311Q8N616 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LINC00311Q8N616 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
LINC00311Q8N616 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
LINC00311Q8N616 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC00311Q8N616 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
LINC00311Q8N616 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00311Q8N616 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00311Q8N616 REXO1L6P-202ENST00000619970 1078 ntBASIC14.07□□□□□ -0.16
LINC00311Q8N616 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00311Q8N616 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00311Q8N616 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00311Q8N616 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00311Q8N616 PRORSD1P-202ENST00000563365 2154 ntBASIC14.07□□□□□ -0.16
LINC00311Q8N616 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00311Q8N616 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LINC00311Q8N616 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LINC00311Q8N616 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00311Q8N616 AL356309.3-201ENST00000624132 1934 ntBASIC14.07□□□□□ -0.16
LINC00311Q8N616 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00311Q8N616 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC00311Q8N616 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LINC00311Q8N616 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LINC00311Q8N616 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LINC00311Q8N616 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00311Q8N616 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LINC00311Q8N616 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00311Q8N616 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00311Q8N616 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
LINC00311Q8N616 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00311Q8N616 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC00311Q8N616 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
LINC00311Q8N616 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
LINC00311Q8N616 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00311Q8N616 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00311Q8N616 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
LINC00311Q8N616 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
LINC00311Q8N616 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00311Q8N616 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00311Q8N616 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC00311Q8N616 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00311Q8N616 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC00311Q8N616 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00311Q8N616 AC097637.2-201ENST00000624096 1997 ntBASIC14.06□□□□□ -0.16
LINC00311Q8N616 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
LINC00311Q8N616 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.06□□□□□ -0.16
LINC00311Q8N616 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00311Q8N616 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00311Q8N616 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00311Q8N616 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC00311Q8N616 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00311Q8N616 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00311Q8N616 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00311Q8N616 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00311Q8N616 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
LINC00311Q8N616 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.06□□□□□ -0.16
LINC00311Q8N616 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.06□□□□□ -0.16
LINC00311Q8N616 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC00311Q8N616 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.06□□□□□ -0.16
LINC00311Q8N616 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.06□□□□□ -0.16
LINC00311Q8N616 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00311Q8N616 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.06□□□□□ -0.16
LINC00311Q8N616 MTDHP3-201ENST00000594186 672 ntBASIC14.06□□□□□ -0.16
LINC00311Q8N616 CLEC4GP1-201ENST00000596555 870 ntBASIC14.06□□□□□ -0.16
LINC00311Q8N616 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00311Q8N616 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
LINC00311Q8N616 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00311Q8N616 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00311Q8N616 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00311Q8N616 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00311Q8N616 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00311Q8N616 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
LINC00311Q8N616 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00311Q8N616 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00311Q8N616 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00311Q8N616 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.06□□□□□ -0.16
LINC00311Q8N616 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00311Q8N616 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00311Q8N616 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00311Q8N616 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00311Q8N616 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC00311Q8N616 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00311Q8N616 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00311Q8N616 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00311Q8N616 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC00311Q8N616 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LINC00311Q8N616 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00311Q8N616 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC00311Q8N616 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms