Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 AL353692.3-201ENST00000407031 1396 ntBASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 AP003733.1-201ENST00000491725 852 ntBASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 AC079602.3-201ENST00000623931 403 ntBASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC01561Q8N1V8 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 STARP1-201ENST00000397973 869 ntBASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms