Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHPFQ8IZ52 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHPFQ8IZ52 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHPFQ8IZ52 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 MYCLP1-201ENST00000372451 1075 ntBASIC17.69■□□□□ 0.42
CHPFQ8IZ52 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.69■□□□□ 0.42
CHPFQ8IZ52 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 AC004790.2-201ENST00000623588 572 ntBASIC17.69■□□□□ 0.42
CHPFQ8IZ52 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHPFQ8IZ52 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 AP001160.2-201ENST00000596071 487 ntBASIC17.68■□□□□ 0.42
CHPFQ8IZ52 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 AC134684.3-201ENST00000641758 218 ntBASIC17.68■□□□□ 0.42
CHPFQ8IZ52 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.68■□□□□ 0.42
CHPFQ8IZ52 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHPFQ8IZ52 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.67■□□□□ 0.42
CHPFQ8IZ52 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHPFQ8IZ52 AC002310.6-201ENST00000624451 1377 ntBASIC17.67■□□□□ 0.42
CHPFQ8IZ52 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.67■□□□□ 0.42
CHPFQ8IZ52 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHPFQ8IZ52 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
CHPFQ8IZ52 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHPFQ8IZ52 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHPFQ8IZ52 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHPFQ8IZ52 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHPFQ8IZ52 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHPFQ8IZ52 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHPFQ8IZ52 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHPFQ8IZ52 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CHPFQ8IZ52 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHPFQ8IZ52 PRSS29P-201ENST00000440800 595 ntBASIC17.67■□□□□ 0.42
CHPFQ8IZ52 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.67■□□□□ 0.42
CHPFQ8IZ52 AC018845.2-201ENST00000568326 409 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms