Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 FAM86EP-206ENST00000510506 987 ntBASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 AL353801.3-201ENST00000609898 542 ntBASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 AC060834.1-201ENST00000443027 2032 ntBASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 AC016734.2-201ENST00000624325 1377 ntBASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 CHCHD2P8-201ENST00000429873 447 ntBASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 AC087388.1-201ENST00000571370 1112 ntBASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 AC084018.2-201ENST00000613093 2607 ntBASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.4■□□□□ 0.06
LINC00346Q8IVM7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.06
LINC00346Q8IVM7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00346Q8IVM7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00346Q8IVM7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00346Q8IVM7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.39■□□□□ 0.05
LINC00346Q8IVM7 AC116353.5-201ENST00000638148 1699 ntBASIC15.39■□□□□ 0.05
LINC00346Q8IVM7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LINC00346Q8IVM7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.39■□□□□ 0.05
LINC00346Q8IVM7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00346Q8IVM7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00346Q8IVM7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00346Q8IVM7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
LINC00346Q8IVM7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00346Q8IVM7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00346Q8IVM7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
LINC00346Q8IVM7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00346Q8IVM7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00346Q8IVM7 FAM210CP-201ENST00000445714 574 ntBASIC15.39■□□□□ 0.05
LINC00346Q8IVM7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.39■□□□□ 0.05
LINC00346Q8IVM7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.39■□□□□ 0.05
LINC00346Q8IVM7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.39■□□□□ 0.05
LINC00346Q8IVM7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00346Q8IVM7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.39■□□□□ 0.05
LINC00346Q8IVM7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.39■□□□□ 0.05
LINC00346Q8IVM7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms