Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CCDC71Q8IV32 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC71Q8IV32 CICP6-201ENST00000457191 2729 ntBASIC16.32■□□□□ 0.2
CCDC71Q8IV32 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC71Q8IV32 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC71Q8IV32 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC71Q8IV32 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
CCDC71Q8IV32 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC71Q8IV32 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CCDC71Q8IV32 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC71Q8IV32 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC71Q8IV32 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC71Q8IV32 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC71Q8IV32 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC71Q8IV32 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC71Q8IV32 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC71Q8IV32 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC71Q8IV32 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC71Q8IV32 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC71Q8IV32 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC71Q8IV32 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC71Q8IV32 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC71Q8IV32 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC71Q8IV32 AL160237.2-201ENST00000556165 472 ntBASIC16.32■□□□□ 0.2
CCDC71Q8IV32 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC71Q8IV32 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CCDC71Q8IV32 Z69720.1-201ENST00000601483 472 ntBASIC16.32■□□□□ 0.2
CCDC71Q8IV32 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC71Q8IV32 AL592071.1-201ENST00000611956 408 ntBASIC16.32■□□□□ 0.2
CCDC71Q8IV32 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC71Q8IV32 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC71Q8IV32 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
CCDC71Q8IV32 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC71Q8IV32 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC71Q8IV32 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CCDC71Q8IV32 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71Q8IV32 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71Q8IV32 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71Q8IV32 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CCDC71Q8IV32 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CCDC71Q8IV32 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC71Q8IV32 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71Q8IV32 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
CCDC71Q8IV32 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC71Q8IV32 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71Q8IV32 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71Q8IV32 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71Q8IV32 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CCDC71Q8IV32 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71Q8IV32 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71Q8IV32 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC71Q8IV32 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.31■□□□□ 0.2
CCDC71Q8IV32 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.31■□□□□ 0.2
CCDC71Q8IV32 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC71Q8IV32 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC71Q8IV32 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC71Q8IV32 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC71Q8IV32 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71Q8IV32 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71Q8IV32 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71Q8IV32 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71Q8IV32 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71Q8IV32 AC060834.1-201ENST00000443027 2032 ntBASIC16.31■□□□□ 0.2
CCDC71Q8IV32 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71Q8IV32 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC71Q8IV32 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC71Q8IV32 FLJ38576-201ENST00000623820 2459 ntBASIC16.3■□□□□ 0.2
CCDC71Q8IV32 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71Q8IV32 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCDC71Q8IV32 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71Q8IV32 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71Q8IV32 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CCDC71Q8IV32 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCDC71Q8IV32 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CCDC71Q8IV32 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71Q8IV32 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC71Q8IV32 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CCDC71Q8IV32 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71Q8IV32 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71Q8IV32 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CCDC71Q8IV32 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71Q8IV32 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71Q8IV32 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71Q8IV32 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71Q8IV32 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71Q8IV32 AC079776.4-201ENST00000511039 504 ntBASIC16.3■□□□□ 0.2
CCDC71Q8IV32 GUSBP12-201ENST00000513727 720 ntBASIC16.3■□□□□ 0.2
CCDC71Q8IV32 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71Q8IV32 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC71Q8IV32 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71Q8IV32 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC71Q8IV32 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CCDC71Q8IV32 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71Q8IV32 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC71Q8IV32 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCDC71Q8IV32 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCDC71Q8IV32 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71Q8IV32 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71Q8IV32 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71Q8IV32 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms