Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHFQ7M4L6 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHFQ7M4L6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SHFQ7M4L6 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.76■□□□□ 0.11
SHFQ7M4L6 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
SHFQ7M4L6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHFQ7M4L6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
SHFQ7M4L6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
SHFQ7M4L6 AC092171.3-201ENST00000610122 2651 ntBASIC15.75■□□□□ 0.11
SHFQ7M4L6 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.75■□□□□ 0.11
SHFQ7M4L6 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.75■□□□□ 0.11
SHFQ7M4L6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.75■□□□□ 0.11
SHFQ7M4L6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.75■□□□□ 0.11
SHFQ7M4L6 KRT18P48-201ENST00000434763 852 ntBASIC15.75■□□□□ 0.11
SHFQ7M4L6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.75■□□□□ 0.11
SHFQ7M4L6 ATP5G1P1-201ENST00000448724 379 ntBASIC15.75■□□□□ 0.11
SHFQ7M4L6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
SHFQ7M4L6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
SHFQ7M4L6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.75■□□□□ 0.11
SHFQ7M4L6 AL136038.4-201ENST00000603606 1261 ntBASIC15.75■□□□□ 0.11
SHFQ7M4L6 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.75■□□□□ 0.11
SHFQ7M4L6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHFQ7M4L6 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHFQ7M4L6 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.75■□□□□ 0.11
SHFQ7M4L6 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SHFQ7M4L6 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
SHFQ7M4L6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.75■□□□□ 0.11
SHFQ7M4L6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHFQ7M4L6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SHFQ7M4L6 AC116353.5-201ENST00000638148 1699 ntBASIC15.75■□□□□ 0.11
SHFQ7M4L6 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
SHFQ7M4L6 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
SHFQ7M4L6 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SHFQ7M4L6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.75■□□□□ 0.11
SHFQ7M4L6 AC016396.2-201ENST00000562575 1417 ntBASIC15.75■□□□□ 0.11
SHFQ7M4L6 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SHFQ7M4L6 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHFQ7M4L6 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHFQ7M4L6 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHFQ7M4L6 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHFQ7M4L6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SHFQ7M4L6 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SHFQ7M4L6 AL391807.1-203ENST00000604392 2365 ntBASIC15.75■□□□□ 0.11
SHFQ7M4L6 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHFQ7M4L6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
SHFQ7M4L6 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SHFQ7M4L6 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.74■□□□□ 0.11
SHFQ7M4L6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SHFQ7M4L6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
SHFQ7M4L6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SHFQ7M4L6 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
SHFQ7M4L6 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHFQ7M4L6 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SHFQ7M4L6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SHFQ7M4L6 RNF216P1-203ENST00000404404 2427 ntBASIC15.74■□□□□ 0.11
SHFQ7M4L6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.74■□□□□ 0.11
SHFQ7M4L6 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.74■□□□□ 0.11
SHFQ7M4L6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.74■□□□□ 0.11
SHFQ7M4L6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.74■□□□□ 0.11
SHFQ7M4L6 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.74■□□□□ 0.11
SHFQ7M4L6 SLC25A3P1-201ENST00000443844 931 ntBASIC15.74■□□□□ 0.11
SHFQ7M4L6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
SHFQ7M4L6 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.74■□□□□ 0.11
SHFQ7M4L6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.74■□□□□ 0.11
SHFQ7M4L6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SHFQ7M4L6 AC009154.2-201ENST00000621177 724 ntBASIC15.74■□□□□ 0.11
SHFQ7M4L6 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
SHFQ7M4L6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SHFQ7M4L6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHFQ7M4L6 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.74■□□□□ 0.11
SHFQ7M4L6 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHFQ7M4L6 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
SHFQ7M4L6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
SHFQ7M4L6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.74■□□□□ 0.11
SHFQ7M4L6 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.74■□□□□ 0.11
SHFQ7M4L6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.74■□□□□ 0.11
SHFQ7M4L6 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHFQ7M4L6 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHFQ7M4L6 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHFQ7M4L6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
SHFQ7M4L6 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.74■□□□□ 0.11
SHFQ7M4L6 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHFQ7M4L6 AC092053.1-201ENST00000605787 1936 ntBASIC15.74■□□□□ 0.11
SHFQ7M4L6 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.74■□□□□ 0.11
SHFQ7M4L6 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHFQ7M4L6 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SHFQ7M4L6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SHFQ7M4L6 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.74■□□□□ 0.11
SHFQ7M4L6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SHFQ7M4L6 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.73■□□□□ 0.11
SHFQ7M4L6 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SHFQ7M4L6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SHFQ7M4L6 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.73■□□□□ 0.11
SHFQ7M4L6 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SHFQ7M4L6 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SHFQ7M4L6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.73■□□□□ 0.11
SHFQ7M4L6 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SHFQ7M4L6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SHFQ7M4L6 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
SHFQ7M4L6 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms