Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DCLRE1AQ6PJP8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.53■□□□□ 0.56
DCLRE1AQ6PJP8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DCLRE1AQ6PJP8 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
DCLRE1AQ6PJP8 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DCLRE1AQ6PJP8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
DCLRE1AQ6PJP8 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.53■□□□□ 0.56
DCLRE1AQ6PJP8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.53■□□□□ 0.56
DCLRE1AQ6PJP8 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.53■□□□□ 0.56
DCLRE1AQ6PJP8 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DCLRE1AQ6PJP8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.53■□□□□ 0.56
DCLRE1AQ6PJP8 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DCLRE1AQ6PJP8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.53■□□□□ 0.56
DCLRE1AQ6PJP8 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.53■□□□□ 0.56
DCLRE1AQ6PJP8 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
DCLRE1AQ6PJP8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
DCLRE1AQ6PJP8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
DCLRE1AQ6PJP8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
DCLRE1AQ6PJP8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
DCLRE1AQ6PJP8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
DCLRE1AQ6PJP8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DCLRE1AQ6PJP8 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DCLRE1AQ6PJP8 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
DCLRE1AQ6PJP8 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
DCLRE1AQ6PJP8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
DCLRE1AQ6PJP8 MCCD1P2-201ENST00000423228 335 ntBASIC18.52■□□□□ 0.56
DCLRE1AQ6PJP8 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.52■□□□□ 0.56
DCLRE1AQ6PJP8 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.52■□□□□ 0.56
DCLRE1AQ6PJP8 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.52■□□□□ 0.56
DCLRE1AQ6PJP8 OR7E47P-204ENST00000575924 449 ntBASIC18.52■□□□□ 0.56
DCLRE1AQ6PJP8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.52■□□□□ 0.56
DCLRE1AQ6PJP8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DCLRE1AQ6PJP8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
DCLRE1AQ6PJP8 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.52■□□□□ 0.55
DCLRE1AQ6PJP8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
DCLRE1AQ6PJP8 AC002310.6-201ENST00000624451 1377 ntBASIC18.52■□□□□ 0.55
DCLRE1AQ6PJP8 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
DCLRE1AQ6PJP8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.52■□□□□ 0.55
DCLRE1AQ6PJP8 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
DCLRE1AQ6PJP8 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DCLRE1AQ6PJP8 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.51■□□□□ 0.55
DCLRE1AQ6PJP8 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DCLRE1AQ6PJP8 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DCLRE1AQ6PJP8 NOC2LP2-201ENST00000407594 1944 ntBASIC18.51■□□□□ 0.55
DCLRE1AQ6PJP8 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
DCLRE1AQ6PJP8 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DCLRE1AQ6PJP8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DCLRE1AQ6PJP8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.51■□□□□ 0.55
DCLRE1AQ6PJP8 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DCLRE1AQ6PJP8 AC020916.1-201ENST00000587762 1774 ntBASIC18.51■□□□□ 0.55
DCLRE1AQ6PJP8 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
DCLRE1AQ6PJP8 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
DCLRE1AQ6PJP8 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DCLRE1AQ6PJP8 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
DCLRE1AQ6PJP8 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.51■□□□□ 0.55
DCLRE1AQ6PJP8 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
DCLRE1AQ6PJP8 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.51■□□□□ 0.55
DCLRE1AQ6PJP8 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.51■□□□□ 0.55
DCLRE1AQ6PJP8 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
DCLRE1AQ6PJP8 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
DCLRE1AQ6PJP8 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.51■□□□□ 0.55
DCLRE1AQ6PJP8 LTB4R2-202ENST00000528054 3092 ntBASIC18.51■□□□□ 0.55
DCLRE1AQ6PJP8 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.51■□□□□ 0.55
DCLRE1AQ6PJP8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DCLRE1AQ6PJP8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DCLRE1AQ6PJP8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.51■□□□□ 0.55
DCLRE1AQ6PJP8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
DCLRE1AQ6PJP8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DCLRE1AQ6PJP8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
DCLRE1AQ6PJP8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
DCLRE1AQ6PJP8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DCLRE1AQ6PJP8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DCLRE1AQ6PJP8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DCLRE1AQ6PJP8 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DCLRE1AQ6PJP8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
DCLRE1AQ6PJP8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
DCLRE1AQ6PJP8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
DCLRE1AQ6PJP8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.5■□□□□ 0.55
DCLRE1AQ6PJP8 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
DCLRE1AQ6PJP8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DCLRE1AQ6PJP8 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
DCLRE1AQ6PJP8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DCLRE1AQ6PJP8 IGLL3P-201ENST00000412472 434 ntBASIC18.5■□□□□ 0.55
DCLRE1AQ6PJP8 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.5■□□□□ 0.55
DCLRE1AQ6PJP8 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.5■□□□□ 0.55
DCLRE1AQ6PJP8 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.5■□□□□ 0.55
DCLRE1AQ6PJP8 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.5■□□□□ 0.55
DCLRE1AQ6PJP8 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
DCLRE1AQ6PJP8 AC096734.2-201ENST00000562054 433 ntBASIC18.5■□□□□ 0.55
DCLRE1AQ6PJP8 AC018845.2-201ENST00000568326 409 ntBASIC18.5■□□□□ 0.55
DCLRE1AQ6PJP8 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
DCLRE1AQ6PJP8 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.5■□□□□ 0.55
DCLRE1AQ6PJP8 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
DCLRE1AQ6PJP8 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.5■□□□□ 0.55
DCLRE1AQ6PJP8 AC134684.3-201ENST00000641758 218 ntBASIC18.5■□□□□ 0.55
DCLRE1AQ6PJP8 AC092865.6-201ENST00000642101 219 ntBASIC18.5■□□□□ 0.55
DCLRE1AQ6PJP8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DCLRE1AQ6PJP8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DCLRE1AQ6PJP8 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
DCLRE1AQ6PJP8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms