Protein–RNA interactions for Protein: Q53RE8

ANKRD39, Ankyrin repeat domain-containing protein 39, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD39Q53RE8 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ANKRD39Q53RE8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ANKRD39Q53RE8 SLC35A4-201ENST00000323146 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ANKRD39Q53RE8 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
ANKRD39Q53RE8 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ANKRD39Q53RE8 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ANKRD39Q53RE8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 KRT18P16-201ENST00000510337 1294 ntBASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 UBE2DNL-204ENST00000602536 740 ntBASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 NID2-208ENST00000617139 3827 ntTSL 5 BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 SRRT-216ENST00000618262 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 AL365203.3-201ENST00000609742 2057 ntBASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 SNHG20-202ENST00000434411 2143 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ANKRD39Q53RE8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 HES2-206ENST00000489730 730 ntTSL 2 BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 KRT18P41-201ENST00000518924 1277 ntBASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 AC027601.5-201ENST00000624065 2482 ntBASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 LSINCT5-201ENST00000626215 2647 ntBASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 AC116353.5-201ENST00000638148 1699 ntBASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
ANKRD39Q53RE8 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
ANKRD39Q53RE8 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
ANKRD39Q53RE8 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
ANKRD39Q53RE8 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ANKRD39Q53RE8 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
ANKRD39Q53RE8 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC12.5□□□□□ -0.41
ANKRD39Q53RE8 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
ANKRD39Q53RE8 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ANKRD39Q53RE8 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
ANKRD39Q53RE8 ACADL-201ENST00000233710 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms