Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL20P78556 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC13.71□□□□□ -0.21
CCL20P78556 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
CCL20P78556 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL20P78556 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC13.71□□□□□ -0.21
CCL20P78556 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC13.71□□□□□ -0.21
CCL20P78556 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC13.71□□□□□ -0.21
CCL20P78556 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC13.71□□□□□ -0.21
CCL20P78556 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC13.71□□□□□ -0.21
CCL20P78556 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL20P78556 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC13.71□□□□□ -0.21
CCL20P78556 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
CCL20P78556 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL20P78556 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL20P78556 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL20P78556 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
CCL20P78556 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL20P78556 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL20P78556 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL20P78556 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL20P78556 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCL20P78556 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCL20P78556 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCL20P78556 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.71□□□□□ -0.22
CCL20P78556 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCL20P78556 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCL20P78556 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CCL20P78556 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCL20P78556 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC13.71□□□□□ -0.22
CCL20P78556 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC13.71□□□□□ -0.22
CCL20P78556 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CCL20P78556 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL20P78556 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL20P78556 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL20P78556 ALOX12P2-203ENST00000570921 1945 ntBASIC13.7□□□□□ -0.22
CCL20P78556 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL20P78556 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL20P78556 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CCL20P78556 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL20P78556 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL20P78556 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CCL20P78556 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.7□□□□□ -0.22
CCL20P78556 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
CCL20P78556 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.7□□□□□ -0.22
CCL20P78556 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL20P78556 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
CCL20P78556 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CCL20P78556 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL20P78556 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL20P78556 NIFKP9-201ENST00000419265 221 ntBASIC13.7□□□□□ -0.22
CCL20P78556 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL20P78556 KRT16P5-201ENST00000455284 522 ntBASIC13.7□□□□□ -0.22
CCL20P78556 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC13.7□□□□□ -0.22
CCL20P78556 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC13.7□□□□□ -0.22
CCL20P78556 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC13.7□□□□□ -0.22
CCL20P78556 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CCL20P78556 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL20P78556 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL20P78556 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL20P78556 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL20P78556 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.7□□□□□ -0.22
CCL20P78556 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.7□□□□□ -0.22
CCL20P78556 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CCL20P78556 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.7□□□□□ -0.22
CCL20P78556 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL20P78556 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL20P78556 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL20P78556 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL20P78556 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC13.7□□□□□ -0.22
CCL20P78556 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL20P78556 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL20P78556 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL20P78556 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC13.69□□□□□ -0.22
CCL20P78556 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CCL20P78556 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL20P78556 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL20P78556 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL20P78556 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL20P78556 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL20P78556 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL20P78556 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL20P78556 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC13.69□□□□□ -0.22
CCL20P78556 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL20P78556 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL20P78556 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.69□□□□□ -0.22
CCL20P78556 MED29-202ENST00000594368 1471 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL20P78556 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
CCL20P78556 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL20P78556 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL20P78556 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL20P78556 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL20P78556 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.69□□□□□ -0.22
CCL20P78556 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL20P78556 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL20P78556 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL20P78556 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL20P78556 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL20P78556 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL20P78556 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL20P78556 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms