Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
IRX3P78415 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
IRX3P78415 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
IRX3P78415 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IRX3P78415 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
IRX3P78415 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.2■□□□□ 0.82
IRX3P78415 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC20.2■□□□□ 0.82
IRX3P78415 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.2■□□□□ 0.82
IRX3P78415 AP002472.1-201ENST00000577490 586 ntBASIC20.2■□□□□ 0.82
IRX3P78415 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.2■□□□□ 0.82
IRX3P78415 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
IRX3P78415 AL353135.1-201ENST00000606729 504 ntBASIC20.2■□□□□ 0.82
IRX3P78415 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
IRX3P78415 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IRX3P78415 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IRX3P78415 LTF-203ENST00000426532 2494 ntTSL 2 BASIC20.2■□□□□ 0.82
IRX3P78415 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.2■□□□□ 0.82
IRX3P78415 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
IRX3P78415 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IRX3P78415 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
IRX3P78415 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
IRX3P78415 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
IRX3P78415 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
IRX3P78415 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IRX3P78415 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
IRX3P78415 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
IRX3P78415 AC093677.2-201ENST00000600169 1863 ntBASIC20.2■□□□□ 0.82
IRX3P78415 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.2■□□□□ 0.82
IRX3P78415 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.19■□□□□ 0.82
IRX3P78415 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.19■□□□□ 0.82
IRX3P78415 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
IRX3P78415 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
IRX3P78415 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IRX3P78415 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IRX3P78415 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.19■□□□□ 0.82
IRX3P78415 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
IRX3P78415 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
IRX3P78415 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IRX3P78415 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
IRX3P78415 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
IRX3P78415 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
IRX3P78415 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
IRX3P78415 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
IRX3P78415 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
IRX3P78415 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
IRX3P78415 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
IRX3P78415 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
IRX3P78415 LINC00982-205ENST00000420957 435 ntBASIC20.19■□□□□ 0.82
IRX3P78415 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.19■□□□□ 0.82
IRX3P78415 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.19■□□□□ 0.82
IRX3P78415 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.19■□□□□ 0.82
IRX3P78415 KRT19P2-202ENST00000557173 1012 ntBASIC20.19■□□□□ 0.82
IRX3P78415 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.19■□□□□ 0.82
IRX3P78415 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC20.19■□□□□ 0.82
IRX3P78415 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
IRX3P78415 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.19■□□□□ 0.82
IRX3P78415 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
IRX3P78415 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
IRX3P78415 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.19■□□□□ 0.82
IRX3P78415 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IRX3P78415 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.19■□□□□ 0.82
IRX3P78415 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
IRX3P78415 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
IRX3P78415 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.18■□□□□ 0.82
IRX3P78415 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
IRX3P78415 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
IRX3P78415 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
IRX3P78415 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
IRX3P78415 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
IRX3P78415 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.18■□□□□ 0.82
IRX3P78415 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.18■□□□□ 0.82
IRX3P78415 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
IRX3P78415 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.18■□□□□ 0.82
IRX3P78415 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.18■□□□□ 0.82
IRX3P78415 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.18■□□□□ 0.82
IRX3P78415 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.18■□□□□ 0.82
IRX3P78415 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.18■□□□□ 0.82
IRX3P78415 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.18■□□□□ 0.82
IRX3P78415 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
IRX3P78415 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.18■□□□□ 0.82
IRX3P78415 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
IRX3P78415 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
IRX3P78415 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
IRX3P78415 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
IRX3P78415 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
IRX3P78415 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.18■□□□□ 0.82
IRX3P78415 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.18■□□□□ 0.82
IRX3P78415 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.18■□□□□ 0.82
IRX3P78415 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.18■□□□□ 0.82
IRX3P78415 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.18■□□□□ 0.82
IRX3P78415 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IRX3P78415 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.17■□□□□ 0.82
IRX3P78415 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IRX3P78415 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
IRX3P78415 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IRX3P78415 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.17■□□□□ 0.82
IRX3P78415 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IRX3P78415 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
IRX3P78415 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.17■□□□□ 0.82
IRX3P78415 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms