Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
YBX1P67809 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
YBX1P67809 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.95■□□□□ 0.3
YBX1P67809 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.95■□□□□ 0.3
YBX1P67809 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
YBX1P67809 AF238378.1-201ENST00000526806 358 ntBASIC16.95■□□□□ 0.3
YBX1P67809 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.95■□□□□ 0.3
YBX1P67809 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.95■□□□□ 0.3
YBX1P67809 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.95■□□□□ 0.3
YBX1P67809 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.95■□□□□ 0.3
YBX1P67809 AL121894.2-201ENST00000602977 491 ntBASIC16.95■□□□□ 0.3
YBX1P67809 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
YBX1P67809 AD001527.2-201ENST00000622994 785 ntBASIC16.95■□□□□ 0.3
YBX1P67809 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
YBX1P67809 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
YBX1P67809 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
YBX1P67809 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
YBX1P67809 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
YBX1P67809 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
YBX1P67809 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
YBX1P67809 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
YBX1P67809 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
YBX1P67809 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.94■□□□□ 0.3
YBX1P67809 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
YBX1P67809 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.94■□□□□ 0.3
YBX1P67809 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
YBX1P67809 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.94■□□□□ 0.3
YBX1P67809 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
YBX1P67809 AC132938.5-201ENST00000624980 1813 ntBASIC16.94■□□□□ 0.3
YBX1P67809 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
YBX1P67809 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.94■□□□□ 0.3
YBX1P67809 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.94■□□□□ 0.3
YBX1P67809 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
YBX1P67809 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
YBX1P67809 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
YBX1P67809 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
YBX1P67809 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
YBX1P67809 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
YBX1P67809 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
YBX1P67809 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.94■□□□□ 0.3
YBX1P67809 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
YBX1P67809 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.94■□□□□ 0.3
YBX1P67809 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.94■□□□□ 0.3
YBX1P67809 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
YBX1P67809 AL691432.3-201ENST00000621860 400 ntBASIC16.94■□□□□ 0.3
YBX1P67809 HLA-J-201ENST00000462773 1622 ntBASIC16.94■□□□□ 0.3
YBX1P67809 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.94■□□□□ 0.3
YBX1P67809 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
YBX1P67809 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.94■□□□□ 0.3
YBX1P67809 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
YBX1P67809 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
YBX1P67809 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
YBX1P67809 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.94■□□□□ 0.3
YBX1P67809 AC004817.3-201ENST00000602957 2129 ntBASIC16.94■□□□□ 0.3
YBX1P67809 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
YBX1P67809 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
YBX1P67809 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
YBX1P67809 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
YBX1P67809 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
YBX1P67809 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
YBX1P67809 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
YBX1P67809 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
YBX1P67809 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
YBX1P67809 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
YBX1P67809 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
YBX1P67809 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
YBX1P67809 PCDH8P1-201ENST00000428983 2773 ntBASIC16.93■□□□□ 0.3
YBX1P67809 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.93■□□□□ 0.3
YBX1P67809 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
YBX1P67809 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
YBX1P67809 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
YBX1P67809 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.93■□□□□ 0.3
YBX1P67809 AC005104.2-201ENST00000427818 678 ntBASIC16.93■□□□□ 0.3
YBX1P67809 RN7SL510P-201ENST00000581311 263 ntBASIC16.93■□□□□ 0.3
YBX1P67809 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.93■□□□□ 0.3
YBX1P67809 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
YBX1P67809 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.93■□□□□ 0.3
YBX1P67809 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
YBX1P67809 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.93■□□□□ 0.3
YBX1P67809 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
YBX1P67809 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
YBX1P67809 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
YBX1P67809 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
YBX1P67809 AC008894.3-201ENST00000624324 3103 ntBASIC16.93■□□□□ 0.3
YBX1P67809 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
YBX1P67809 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
YBX1P67809 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
YBX1P67809 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
YBX1P67809 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.93■□□□□ 0.3
YBX1P67809 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.93■□□□□ 0.3
YBX1P67809 AL121761.2-201ENST00000598007 1648 ntBASIC16.92■□□□□ 0.3
YBX1P67809 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
YBX1P67809 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.92■□□□□ 0.3
YBX1P67809 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
YBX1P67809 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
YBX1P67809 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
YBX1P67809 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
YBX1P67809 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
YBX1P67809 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
YBX1P67809 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms