Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO4P61968 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.2□□□□□ -0.14
LMO4P61968 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.2□□□□□ -0.14
LMO4P61968 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.2□□□□□ -0.14
LMO4P61968 ACTG1P14-201ENST00000446382 1122 ntBASIC14.2□□□□□ -0.14
LMO4P61968 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.2□□□□□ -0.14
LMO4P61968 AL513480.1-201ENST00000451731 511 ntBASIC14.2□□□□□ -0.14
LMO4P61968 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
LMO4P61968 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.2□□□□□ -0.14
LMO4P61968 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.2□□□□□ -0.14
LMO4P61968 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
LMO4P61968 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LMO4P61968 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
LMO4P61968 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LMO4P61968 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LMO4P61968 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.2□□□□□ -0.14
LMO4P61968 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.2□□□□□ -0.14
LMO4P61968 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.2□□□□□ -0.14
LMO4P61968 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LMO4P61968 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
LMO4P61968 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC14.2□□□□□ -0.14
LMO4P61968 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO4P61968 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LMO4P61968 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO4P61968 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LMO4P61968 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO4P61968 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
LMO4P61968 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO4P61968 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LMO4P61968 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO4P61968 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.19□□□□□ -0.14
LMO4P61968 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LMO4P61968 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO4P61968 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.19□□□□□ -0.14
LMO4P61968 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LMO4P61968 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.19□□□□□ -0.14
LMO4P61968 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.19□□□□□ -0.14
LMO4P61968 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO4P61968 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO4P61968 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO4P61968 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO4P61968 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LMO4P61968 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LMO4P61968 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.19□□□□□ -0.14
LMO4P61968 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.19□□□□□ -0.14
LMO4P61968 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LMO4P61968 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LMO4P61968 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO4P61968 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO4P61968 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LMO4P61968 CNN2P11-201ENST00000429351 262 ntBASIC14.19□□□□□ -0.14
LMO4P61968 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.19□□□□□ -0.14
LMO4P61968 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.19□□□□□ -0.14
LMO4P61968 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.19□□□□□ -0.14
LMO4P61968 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.19□□□□□ -0.14
LMO4P61968 AC091812.2-201ENST00000619081 385 ntBASIC14.19□□□□□ -0.14
LMO4P61968 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO4P61968 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO4P61968 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.19□□□□□ -0.14
LMO4P61968 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO4P61968 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LMO4P61968 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO4P61968 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LMO4P61968 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LMO4P61968 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO4P61968 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LMO4P61968 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO4P61968 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO4P61968 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.18□□□□□ -0.14
LMO4P61968 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.18□□□□□ -0.14
LMO4P61968 KRT18P28-201ENST00000453838 1332 ntBASIC14.18□□□□□ -0.14
LMO4P61968 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO4P61968 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO4P61968 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO4P61968 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LMO4P61968 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO4P61968 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO4P61968 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO4P61968 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC14.18□□□□□ -0.14
LMO4P61968 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
LMO4P61968 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LMO4P61968 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO4P61968 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO4P61968 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.18□□□□□ -0.14
LMO4P61968 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO4P61968 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.18□□□□□ -0.14
LMO4P61968 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.18□□□□□ -0.14
LMO4P61968 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LMO4P61968 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.18□□□□□ -0.14
LMO4P61968 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.18□□□□□ -0.14
LMO4P61968 AP002472.1-201ENST00000577490 586 ntBASIC14.18□□□□□ -0.14
LMO4P61968 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LMO4P61968 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LMO4P61968 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO4P61968 AC068137.2-201ENST00000605408 478 ntBASIC14.18□□□□□ -0.14
LMO4P61968 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.18□□□□□ -0.14
LMO4P61968 AC092902.6-201ENST00000641783 218 ntBASIC14.18□□□□□ -0.14
LMO4P61968 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO4P61968 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO4P61968 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms