Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.87■□□□□ 0.13
CXCR4P61073 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CXCR4P61073 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CXCR4P61073 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CXCR4P61073 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CXCR4P61073 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
CXCR4P61073 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.87■□□□□ 0.13
CXCR4P61073 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CXCR4P61073 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CXCR4P61073 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CXCR4P61073 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CXCR4P61073 TSPY14P-201ENST00000303979 915 ntBASIC15.87■□□□□ 0.13
CXCR4P61073 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CXCR4P61073 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CXCR4P61073 MIR718-201ENST00000390190 70 ntBASIC15.87■□□□□ 0.13
CXCR4P61073 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CXCR4P61073 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CXCR4P61073 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CXCR4P61073 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CXCR4P61073 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.87■□□□□ 0.13
CXCR4P61073 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.13
CXCR4P61073 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.87■□□□□ 0.13
CXCR4P61073 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CXCR4P61073 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CXCR4P61073 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CXCR4P61073 CROCCP1-201ENST00000426910 5675 ntBASIC15.87■□□□□ 0.13
CXCR4P61073 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.87■□□□□ 0.13
CXCR4P61073 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CXCR4P61073 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CXCR4P61073 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.86■□□□□ 0.13
CXCR4P61073 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
CXCR4P61073 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.86■□□□□ 0.13
CXCR4P61073 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
CXCR4P61073 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CXCR4P61073 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
CXCR4P61073 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.86■□□□□ 0.13
CXCR4P61073 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CXCR4P61073 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CXCR4P61073 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CXCR4P61073 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.86■□□□□ 0.13
CXCR4P61073 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CXCR4P61073 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CXCR4P61073 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.86■□□□□ 0.13
CXCR4P61073 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.86■□□□□ 0.13
CXCR4P61073 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CXCR4P61073 AC009947.2-201ENST00000444014 672 ntBASIC15.86■□□□□ 0.13
CXCR4P61073 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.86■□□□□ 0.13
CXCR4P61073 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.86■□□□□ 0.13
CXCR4P61073 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.86■□□□□ 0.13
CXCR4P61073 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.86■□□□□ 0.13
CXCR4P61073 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC15.86■□□□□ 0.13
CXCR4P61073 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CXCR4P61073 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CXCR4P61073 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CXCR4P61073 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CXCR4P61073 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CXCR4P61073 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CXCR4P61073 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CXCR4P61073 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CXCR4P61073 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CXCR4P61073 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CXCR4P61073 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCR4P61073 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCR4P61073 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.85■□□□□ 0.13
CXCR4P61073 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCR4P61073 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.85■□□□□ 0.13
CXCR4P61073 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCR4P61073 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CXCR4P61073 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.85■□□□□ 0.13
CXCR4P61073 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.85■□□□□ 0.13
CXCR4P61073 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CXCR4P61073 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCR4P61073 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.85■□□□□ 0.13
CXCR4P61073 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CXCR4P61073 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCR4P61073 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCR4P61073 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCR4P61073 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC15.85■□□□□ 0.13
CXCR4P61073 AC128688.1-201ENST00000487626 519 ntBASIC15.85■□□□□ 0.13
CXCR4P61073 AC008550.1-201ENST00000511500 884 ntBASIC15.85■□□□□ 0.13
CXCR4P61073 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.85■□□□□ 0.13
CXCR4P61073 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CXCR4P61073 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.85■□□□□ 0.13
CXCR4P61073 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCR4P61073 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CXCR4P61073 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CXCR4P61073 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.85■□□□□ 0.13
CXCR4P61073 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CXCR4P61073 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.85■□□□□ 0.13
CXCR4P61073 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCR4P61073 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CXCR4P61073 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCR4P61073 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.85■□□□□ 0.13
CXCR4P61073 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CXCR4P61073 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CXCR4P61073 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CXCR4P61073 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.85■□□□□ 0.13
CXCR4P61073 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CXCR4P61073 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCR4P61073 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms