Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS3P61009 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS3P61009 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS3P61009 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS3P61009 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS3P61009 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SPCS3P61009 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS3P61009 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS3P61009 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS3P61009 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS3P61009 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS3P61009 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SPCS3P61009 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.2□□□□□ -0.14
SPCS3P61009 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
SPCS3P61009 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.19□□□□□ -0.14
SPCS3P61009 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS3P61009 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS3P61009 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS3P61009 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS3P61009 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS3P61009 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SPCS3P61009 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.19□□□□□ -0.14
SPCS3P61009 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS3P61009 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.19□□□□□ -0.14
SPCS3P61009 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SPCS3P61009 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SPCS3P61009 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS3P61009 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS3P61009 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SPCS3P61009 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.19□□□□□ -0.14
SPCS3P61009 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS3P61009 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.19□□□□□ -0.14
SPCS3P61009 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS3P61009 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
SPCS3P61009 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS3P61009 AC034232.1-201ENST00000506026 1064 ntBASIC14.19□□□□□ -0.14
SPCS3P61009 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.19□□□□□ -0.14
SPCS3P61009 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC14.19□□□□□ -0.14
SPCS3P61009 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS3P61009 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS3P61009 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.19□□□□□ -0.14
SPCS3P61009 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS3P61009 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS3P61009 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS3P61009 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS3P61009 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS3P61009 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS3P61009 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.19□□□□□ -0.14
SPCS3P61009 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
SPCS3P61009 HYMAI-201ENST00000635591 3347 ntBASIC14.19□□□□□ -0.14
SPCS3P61009 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS3P61009 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SPCS3P61009 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.19□□□□□ -0.14
SPCS3P61009 LINC02228-204ENST00000642115 2962 ntBASIC14.19□□□□□ -0.14
SPCS3P61009 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS3P61009 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.18□□□□□ -0.14
SPCS3P61009 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.18□□□□□ -0.14
SPCS3P61009 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS3P61009 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.18□□□□□ -0.14
SPCS3P61009 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS3P61009 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS3P61009 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SPCS3P61009 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS3P61009 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.18□□□□□ -0.14
SPCS3P61009 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SPCS3P61009 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS3P61009 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS3P61009 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.18□□□□□ -0.14
SPCS3P61009 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SPCS3P61009 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS3P61009 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS3P61009 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS3P61009 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS3P61009 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS3P61009 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.18□□□□□ -0.14
SPCS3P61009 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.18□□□□□ -0.14
SPCS3P61009 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.18□□□□□ -0.14
SPCS3P61009 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14.18□□□□□ -0.14
SPCS3P61009 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SPCS3P61009 AC005104.2-201ENST00000427818 678 ntBASIC14.18□□□□□ -0.14
SPCS3P61009 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.18□□□□□ -0.14
SPCS3P61009 AL355075.4-201ENST00000554988 638 ntBASIC14.18□□□□□ -0.14
SPCS3P61009 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.18□□□□□ -0.14
SPCS3P61009 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
SPCS3P61009 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS3P61009 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS3P61009 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS3P61009 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.18□□□□□ -0.14
SPCS3P61009 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS3P61009 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SPCS3P61009 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS3P61009 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SPCS3P61009 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.18□□□□□ -0.14
SPCS3P61009 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS3P61009 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.18□□□□□ -0.14
SPCS3P61009 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS3P61009 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS3P61009 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.18□□□□□ -0.14
SPCS3P61009 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS3P61009 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms