Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
EPHA4P54764 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.72■□□□□ 0.27
EPHA4P54764 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.72■□□□□ 0.27
EPHA4P54764 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
EPHA4P54764 AC004790.2-201ENST00000623588 572 ntBASIC16.72■□□□□ 0.27
EPHA4P54764 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHA4P54764 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHA4P54764 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.72■□□□□ 0.27
EPHA4P54764 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.72■□□□□ 0.27
EPHA4P54764 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EPHA4P54764 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHA4P54764 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
EPHA4P54764 AL135999.2-201ENST00000622438 1686 ntBASIC16.72■□□□□ 0.27
EPHA4P54764 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA4P54764 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.71■□□□□ 0.27
EPHA4P54764 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA4P54764 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA4P54764 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
EPHA4P54764 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA4P54764 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA4P54764 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
EPHA4P54764 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA4P54764 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA4P54764 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA4P54764 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA4P54764 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.71■□□□□ 0.27
EPHA4P54764 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA4P54764 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA4P54764 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.71■□□□□ 0.27
EPHA4P54764 UPF3AP3-201ENST00000420996 769 ntBASIC16.71■□□□□ 0.27
EPHA4P54764 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.71■□□□□ 0.27
EPHA4P54764 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.71■□□□□ 0.27
EPHA4P54764 HCG4B-203ENST00000450128 991 ntBASIC16.71■□□□□ 0.27
EPHA4P54764 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.71■□□□□ 0.27
EPHA4P54764 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.71■□□□□ 0.27
EPHA4P54764 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.71■□□□□ 0.27
EPHA4P54764 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.71■□□□□ 0.27
EPHA4P54764 AC002310.6-201ENST00000624451 1377 ntBASIC16.71■□□□□ 0.27
EPHA4P54764 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA4P54764 AC006116.8-202ENST00000587620 1550 ntBASIC16.71■□□□□ 0.27
EPHA4P54764 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA4P54764 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
EPHA4P54764 LINC00304-203ENST00000565008 1864 ntBASIC16.71■□□□□ 0.27
EPHA4P54764 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
EPHA4P54764 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA4P54764 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA4P54764 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHA4P54764 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
EPHA4P54764 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.26
EPHA4P54764 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
EPHA4P54764 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
EPHA4P54764 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
EPHA4P54764 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
EPHA4P54764 AL590787.1-201ENST00000568856 1315 ntBASIC16.7■□□□□ 0.26
EPHA4P54764 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA4P54764 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.7■□□□□ 0.26
EPHA4P54764 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA4P54764 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.7■□□□□ 0.26
EPHA4P54764 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.7■□□□□ 0.26
EPHA4P54764 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA4P54764 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
EPHA4P54764 AL133373.2-201ENST00000623187 2828 ntBASIC16.7■□□□□ 0.26
EPHA4P54764 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
EPHA4P54764 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA4P54764 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA4P54764 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.7■□□□□ 0.26
EPHA4P54764 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA4P54764 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA4P54764 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA4P54764 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
EPHA4P54764 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA4P54764 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA4P54764 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.7■□□□□ 0.26
EPHA4P54764 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA4P54764 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.7■□□□□ 0.26
EPHA4P54764 GPX1P2-201ENST00000429271 606 ntBASIC16.7■□□□□ 0.26
EPHA4P54764 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.7■□□□□ 0.26
EPHA4P54764 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.7■□□□□ 0.26
EPHA4P54764 MIR3687-2-201ENST00000577708 61 ntBASIC16.7■□□□□ 0.26
EPHA4P54764 MTDHP5-201ENST00000598980 586 ntBASIC16.7■□□□□ 0.26
EPHA4P54764 MIR3687-1-201ENST00000614492 61 ntBASIC16.7■□□□□ 0.26
EPHA4P54764 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.7■□□□□ 0.26
EPHA4P54764 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.7■□□□□ 0.26
EPHA4P54764 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA4P54764 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.7■□□□□ 0.26
EPHA4P54764 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
EPHA4P54764 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA4P54764 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.7■□□□□ 0.26
EPHA4P54764 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA4P54764 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA4P54764 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA4P54764 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHA4P54764 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EPHA4P54764 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.69■□□□□ 0.26
EPHA4P54764 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EPHA4P54764 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
EPHA4P54764 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.69■□□□□ 0.26
EPHA4P54764 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.69■□□□□ 0.26
EPHA4P54764 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
EPHA4P54764 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms