Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC003669.1-201ENST00000334569 611 ntBASIC18.2■□□□□ 0.5
SLC1A1P43005 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A1P43005 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A1P43005 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A1P43005 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A1P43005 STK19B-204ENST00000512515 211 ntBASIC18.2■□□□□ 0.5
SLC1A1P43005 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.2■□□□□ 0.5
SLC1A1P43005 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.2■□□□□ 0.5
SLC1A1P43005 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
SLC1A1P43005 NTF6B-201ENST00000591913 560 ntBASIC18.2■□□□□ 0.5
SLC1A1P43005 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.2■□□□□ 0.5
SLC1A1P43005 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A1P43005 EGFEM1P-202ENST00000431685 1563 ntBASIC18.2■□□□□ 0.5
SLC1A1P43005 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A1P43005 AGGF1P2-201ENST00000426656 2106 ntBASIC18.2■□□□□ 0.5
SLC1A1P43005 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A1P43005 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A1P43005 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A1P43005 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC1A1P43005 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A1P43005 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A1P43005 AC005332.1-201ENST00000577698 1310 ntBASIC18.2■□□□□ 0.5
SLC1A1P43005 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC1A1P43005 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A1P43005 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A1P43005 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
SLC1A1P43005 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A1P43005 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A1P43005 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A1P43005 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A1P43005 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC1A1P43005 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A1P43005 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A1P43005 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC1A1P43005 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A1P43005 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
SLC1A1P43005 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A1P43005 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A1P43005 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A1P43005 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A1P43005 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A1P43005 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A1P43005 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A1P43005 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A1P43005 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A1P43005 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A1P43005 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A1P43005 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A1P43005 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC1A1P43005 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A1P43005 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.19■□□□□ 0.5
SLC1A1P43005 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC1A1P43005 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.19■□□□□ 0.5
SLC1A1P43005 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.19■□□□□ 0.5
SLC1A1P43005 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.19■□□□□ 0.5
SLC1A1P43005 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A1P43005 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.19■□□□□ 0.5
SLC1A1P43005 AD001527.2-201ENST00000622994 785 ntBASIC18.19■□□□□ 0.5
SLC1A1P43005 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC1A1P43005 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
SLC1A1P43005 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC1A1P43005 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A1P43005 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A1P43005 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SLC1A1P43005 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A1P43005 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A1P43005 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC1A1P43005 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A1P43005 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A1P43005 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC1A1P43005 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SLC1A1P43005 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
SLC1A1P43005 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC1A1P43005 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A1P43005 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A1P43005 AC016734.2-201ENST00000624325 1377 ntBASIC18.18■□□□□ 0.5
SLC1A1P43005 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A1P43005 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC1A1P43005 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A1P43005 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
SLC1A1P43005 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
SLC1A1P43005 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
SLC1A1P43005 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A1P43005 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC1A1P43005 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A1P43005 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A1P43005 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A1P43005 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC1A1P43005 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC1A1P43005 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SLC1A1P43005 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SLC1A1P43005 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
SLC1A1P43005 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SLC1A1P43005 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC1A1P43005 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A1P43005 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC1A1P43005 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC1A1P43005 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC1A1P43005 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC1A1P43005 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms