Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
RFC4P35249 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.68■■□□□ 1.06
RFC4P35249 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
RFC4P35249 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFC4P35249 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RFC4P35249 GAPDHP21-201ENST00000450301 1010 ntBASIC21.68■■□□□ 1.06
RFC4P35249 AL512638.1-201ENST00000457493 794 ntBASIC21.68■■□□□ 1.06
RFC4P35249 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC21.68■■□□□ 1.06
RFC4P35249 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RFC4P35249 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RFC4P35249 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFC4P35249 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFC4P35249 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFC4P35249 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RFC4P35249 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RFC4P35249 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
RFC4P35249 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
RFC4P35249 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFC4P35249 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.68■■□□□ 1.06
RFC4P35249 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RFC4P35249 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFC4P35249 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFC4P35249 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
RFC4P35249 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RFC4P35249 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RFC4P35249 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RFC4P35249 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.67■■□□□ 1.06
RFC4P35249 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.67■■□□□ 1.06
RFC4P35249 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC21.67■■□□□ 1.06
RFC4P35249 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.67■■□□□ 1.06
RFC4P35249 KRT18P55-202ENST00000578578 1546 ntBASIC21.67■■□□□ 1.06
RFC4P35249 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
RFC4P35249 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RFC4P35249 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFC4P35249 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC21.67■■□□□ 1.06
RFC4P35249 SPDYE7P-202ENST00000420373 878 ntBASIC21.67■■□□□ 1.06
RFC4P35249 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFC4P35249 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFC4P35249 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFC4P35249 LINC01225-203ENST00000563550 1244 ntBASIC21.67■■□□□ 1.06
RFC4P35249 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC21.67■■□□□ 1.06
RFC4P35249 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RFC4P35249 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFC4P35249 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFC4P35249 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFC4P35249 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC21.67■■□□□ 1.06
RFC4P35249 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RFC4P35249 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RFC4P35249 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RFC4P35249 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFC4P35249 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.66■■□□□ 1.06
RFC4P35249 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFC4P35249 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC21.66■■□□□ 1.06
RFC4P35249 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RFC4P35249 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
RFC4P35249 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC21.66■■□□□ 1.06
RFC4P35249 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
RFC4P35249 HMGA1P7-201ENST00000406908 502 ntBASIC21.66■■□□□ 1.06
RFC4P35249 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC21.66■■□□□ 1.06
RFC4P35249 KRT8P23-201ENST00000560090 1207 ntBASIC21.66■■□□□ 1.06
RFC4P35249 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RFC4P35249 HFE2-206ENST00000634927 506 ntTSL 4 BASIC21.66■■□□□ 1.06
RFC4P35249 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RFC4P35249 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RFC4P35249 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RFC4P35249 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFC4P35249 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.66■■□□□ 1.06
RFC4P35249 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC21.66■■□□□ 1.06
RFC4P35249 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFC4P35249 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.65■■□□□ 1.06
RFC4P35249 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.65■■□□□ 1.06
RFC4P35249 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RFC4P35249 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFC4P35249 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21.65■■□□□ 1.06
RFC4P35249 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFC4P35249 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFC4P35249 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFC4P35249 SPDYE14P-201ENST00000442619 822 ntBASIC21.65■■□□□ 1.06
RFC4P35249 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC21.65■■□□□ 1.06
RFC4P35249 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC21.65■■□□□ 1.06
RFC4P35249 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC21.65■■□□□ 1.06
RFC4P35249 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFC4P35249 COX11-202ENST00000571584 1108 ntTSL 2 BASIC21.65■■□□□ 1.06
RFC4P35249 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC21.65■■□□□ 1.06
RFC4P35249 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.65■■□□□ 1.06
RFC4P35249 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFC4P35249 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RFC4P35249 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFC4P35249 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFC4P35249 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RFC4P35249 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFC4P35249 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.64■■□□□ 1.06
RFC4P35249 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC21.64■■□□□ 1.06
RFC4P35249 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.06
RFC4P35249 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.06
RFC4P35249 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RFC4P35249 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.64■■□□□ 1.05
RFC4P35249 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC21.64■■□□□ 1.05
RFC4P35249 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RFC4P35249 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms