Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP4AP20648 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
ATP4AP20648 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATP4AP20648 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP4AP20648 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATP4AP20648 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP4AP20648 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATP4AP20648 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP4AP20648 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.24■□□□□ 0.67
ATP4AP20648 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP4AP20648 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP4AP20648 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP4AP20648 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP4AP20648 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ATP4AP20648 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP4AP20648 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.24■□□□□ 0.67
ATP4AP20648 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP4AP20648 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
ATP4AP20648 KRT18P13-201ENST00000400056 1290 ntBASIC19.24■□□□□ 0.67
ATP4AP20648 CRYGEP-201ENST00000412192 528 ntBASIC19.24■□□□□ 0.67
ATP4AP20648 AC023274.1-201ENST00000418278 595 ntBASIC19.24■□□□□ 0.67
ATP4AP20648 BX842568.4-201ENST00000421222 227 ntBASIC19.24■□□□□ 0.67
ATP4AP20648 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.24■□□□□ 0.67
ATP4AP20648 PRSS29P-201ENST00000440800 595 ntBASIC19.24■□□□□ 0.67
ATP4AP20648 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.24■□□□□ 0.67
ATP4AP20648 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.24■□□□□ 0.67
ATP4AP20648 GPALPP1-207ENST00000611650 899 ntBASIC19.24■□□□□ 0.67
ATP4AP20648 AC139530.3-201ENST00000620344 690 ntBASIC19.24■□□□□ 0.67
ATP4AP20648 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ATP4AP20648 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP4AP20648 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP4AP20648 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.24■□□□□ 0.67
ATP4AP20648 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP4AP20648 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATP4AP20648 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP4AP20648 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP4AP20648 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ATP4AP20648 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP4AP20648 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP4AP20648 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.23■□□□□ 0.67
ATP4AP20648 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP4AP20648 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP4AP20648 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP4AP20648 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.23■□□□□ 0.67
ATP4AP20648 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ATP4AP20648 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
ATP4AP20648 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATP4AP20648 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.23■□□□□ 0.67
ATP4AP20648 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.23■□□□□ 0.67
ATP4AP20648 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.23■□□□□ 0.67
ATP4AP20648 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.23■□□□□ 0.67
ATP4AP20648 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.23■□□□□ 0.67
ATP4AP20648 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ATP4AP20648 MIR4751-201ENST00000578027 74 ntBASIC19.23■□□□□ 0.67
ATP4AP20648 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ATP4AP20648 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.23■□□□□ 0.67
ATP4AP20648 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATP4AP20648 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP4AP20648 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP4AP20648 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.23■□□□□ 0.67
ATP4AP20648 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.23■□□□□ 0.67
ATP4AP20648 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP4AP20648 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP4AP20648 AC018470.1-201ENST00000624790 3129 ntBASIC19.23■□□□□ 0.67
ATP4AP20648 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP4AP20648 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP4AP20648 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ATP4AP20648 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ATP4AP20648 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ATP4AP20648 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
ATP4AP20648 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP4AP20648 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.22■□□□□ 0.67
ATP4AP20648 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP4AP20648 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
ATP4AP20648 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP4AP20648 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.22■□□□□ 0.67
ATP4AP20648 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP4AP20648 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP4AP20648 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP4AP20648 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.22■□□□□ 0.67
ATP4AP20648 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.22■□□□□ 0.67
ATP4AP20648 YBX2P1-201ENST00000394192 760 ntBASIC19.22■□□□□ 0.67
ATP4AP20648 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP4AP20648 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.22■□□□□ 0.67
ATP4AP20648 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.22■□□□□ 0.67
ATP4AP20648 AC040169.1-201ENST00000565382 521 ntBASIC19.22■□□□□ 0.67
ATP4AP20648 AC092865.6-201ENST00000642101 219 ntBASIC19.22■□□□□ 0.67
ATP4AP20648 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ATP4AP20648 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ATP4AP20648 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP4AP20648 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP4AP20648 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP4AP20648 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP4AP20648 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP4AP20648 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP4AP20648 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
ATP4AP20648 NOC2LP2-201ENST00000407594 1944 ntBASIC19.21■□□□□ 0.67
ATP4AP20648 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP4AP20648 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP4AP20648 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms