Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A2P16615 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ATP2A2P16615 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP2A2P16615 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP2A2P16615 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
ATP2A2P16615 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A2P16615 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
ATP2A2P16615 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP2A2P16615 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A2P16615 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A2P16615 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP2A2P16615 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.21■□□□□ 0.67
ATP2A2P16615 AC239800.4-201ENST00000603712 296 ntBASIC19.21■□□□□ 0.67
ATP2A2P16615 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A2P16615 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A2P16615 NOC2LP2-201ENST00000407594 1944 ntBASIC19.21■□□□□ 0.67
ATP2A2P16615 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A2P16615 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP2A2P16615 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ATP2A2P16615 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A2P16615 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A2P16615 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A2P16615 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP2A2P16615 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A2P16615 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A2P16615 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A2P16615 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.2■□□□□ 0.66
ATP2A2P16615 AC006504.4-201ENST00000592118 1568 ntBASIC19.2■□□□□ 0.66
ATP2A2P16615 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ATP2A2P16615 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP2A2P16615 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A2P16615 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.2■□□□□ 0.66
ATP2A2P16615 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A2P16615 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A2P16615 PRSS29P-201ENST00000440800 595 ntBASIC19.2■□□□□ 0.66
ATP2A2P16615 AC244107.1-201ENST00000442033 332 ntBASIC19.2■□□□□ 0.66
ATP2A2P16615 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.2■□□□□ 0.66
ATP2A2P16615 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ATP2A2P16615 AC073592.3-201ENST00000625118 1834 ntBASIC19.2■□□□□ 0.66
ATP2A2P16615 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP2A2P16615 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A2P16615 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A2P16615 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A2P16615 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
ATP2A2P16615 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A2P16615 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A2P16615 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ATP2A2P16615 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ATP2A2P16615 KRT8P47-201ENST00000604727 1398 ntBASIC19.19■□□□□ 0.66
ATP2A2P16615 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ATP2A2P16615 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A2P16615 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ATP2A2P16615 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ATP2A2P16615 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A2P16615 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ATP2A2P16615 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ATP2A2P16615 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ATP2A2P16615 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ATP2A2P16615 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.19■□□□□ 0.66
ATP2A2P16615 SPCS2P1-201ENST00000561636 679 ntBASIC19.19■□□□□ 0.66
ATP2A2P16615 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.19■□□□□ 0.66
ATP2A2P16615 AC027612.4-201ENST00000605371 583 ntBASIC19.19■□□□□ 0.66
ATP2A2P16615 AC093028.1-201ENST00000622998 982 ntBASIC19.19■□□□□ 0.66
ATP2A2P16615 AC073592.5-201ENST00000624854 528 ntBASIC19.19■□□□□ 0.66
ATP2A2P16615 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP2A2P16615 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A2P16615 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A2P16615 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP2A2P16615 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A2P16615 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A2P16615 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP2A2P16615 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ATP2A2P16615 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP2A2P16615 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
ATP2A2P16615 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.19■□□□□ 0.66
ATP2A2P16615 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A2P16615 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A2P16615 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A2P16615 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A2P16615 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP2A2P16615 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A2P16615 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A2P16615 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
ATP2A2P16615 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ATP2A2P16615 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A2P16615 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A2P16615 AC010460.3-201ENST00000511359 1579 ntBASIC19.19■□□□□ 0.66
ATP2A2P16615 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
ATP2A2P16615 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
ATP2A2P16615 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP2A2P16615 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A2P16615 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A2P16615 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A2P16615 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
ATP2A2P16615 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A2P16615 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A2P16615 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A2P16615 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.18■□□□□ 0.66
ATP2A2P16615 AL499627.1-201ENST00000569373 2188 ntBASIC19.18■□□□□ 0.66
ATP2A2P16615 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms