Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
IGHV3-43DP0DP04 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.48□□□□□ -0.09
IGHV3-43DP0DP04 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
IGHV3-43DP0DP04 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
IGHV3-43DP0DP04 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.48□□□□□ -0.09
IGHV3-43DP0DP04 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
IGHV3-43DP0DP04 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.48□□□□□ -0.09
IGHV3-43DP0DP04 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.48□□□□□ -0.09
IGHV3-43DP0DP04 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 AC097374.2-201ENST00000618617 1306 ntBASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 AD000864.1-201ENST00000624076 2295 ntBASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 NFIC-211ENST00000641145 8399 ntBASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 PCED1CP-201ENST00000419887 785 ntBASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 CHCHD2P8-201ENST00000429873 447 ntBASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 AL139327.4-201ENST00000612362 153 ntBASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 AC125634.1-201ENST00000438758 1403 ntBASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 AC016734.2-201ENST00000624325 1377 ntBASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGHV3-43DP0DP04 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV3-43DP0DP04 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.46□□□□□ -0.09
IGHV3-43DP0DP04 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV3-43DP0DP04 KRT18P1-202ENST00000452408 1331 ntBASIC14.46□□□□□ -0.09
IGHV3-43DP0DP04 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.46□□□□□ -0.09
IGHV3-43DP0DP04 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
IGHV3-43DP0DP04 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
IGHV3-43DP0DP04 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV3-43DP0DP04 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV3-43DP0DP04 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV3-43DP0DP04 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
IGHV3-43DP0DP04 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV3-43DP0DP04 PRORSD1P-202ENST00000563365 2154 ntBASIC14.46□□□□□ -0.09
IGHV3-43DP0DP04 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV3-43DP0DP04 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.46□□□□□ -0.09
IGHV3-43DP0DP04 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV3-43DP0DP04 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
IGHV3-43DP0DP04 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.46□□□□□ -0.09
IGHV3-43DP0DP04 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV3-43DP0DP04 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.46□□□□□ -0.09
IGHV3-43DP0DP04 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV3-43DP0DP04 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV3-43DP0DP04 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.46□□□□□ -0.09
IGHV3-43DP0DP04 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV3-43DP0DP04 AL590326.2-201ENST00000625139 305 ntBASIC14.46□□□□□ -0.09
IGHV3-43DP0DP04 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
IGHV3-43DP0DP04 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV3-43DP0DP04 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV3-43DP0DP04 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
IGHV3-43DP0DP04 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
IGHV3-43DP0DP04 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.46□□□□□ -0.09
IGHV3-43DP0DP04 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
IGHV3-43DP0DP04 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
IGHV3-43DP0DP04 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.46□□□□□ -0.1
IGHV3-43DP0DP04 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
IGHV3-43DP0DP04 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
IGHV3-43DP0DP04 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms